Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci7g2461 ATGCAATGGGGTCGAATCCTTGCAGATATGAAGCGACCAGTTTCTATAGGGACTCCTTTGATTCTGCCTGCTAAGTATGCGAATTTTAGTGCACTGGACTCTGATGGGTGTAAAAGATCTGTATGCTCGTTAAAAGGGGATTCCCATTCTCAATCACCTAGGAGGCGAGGAGATGGAGGGAGTGGAAGCACCCGATCTTCTTCAATCTTGCAAACGTGGCGAGAGATTGAGGATGAGCATGTGGTGGGTCAAGTCCAAGGAAGACCTAGTGATGAATTACTTCAGCAAAGGAGTGACGAGTTCATCACTGACCTCTCACAGGCAAGTATTCCAGGTAGCCATGAGACAGGAGAGAGGCATGTTGTAGAAGATTCGATTTTGGGTGAGAATGATTGTGAAACATGGTCACAGTCACAAAGTCAGCTTGAATCTCCTGACGAGCAGGATGAATTAAACAATTCTAGTTGTGATAATTCTTCTGATCTTGGAGAAATTGAAAGGGAAAGGGTGAGGCAAATTTTCAGGGAATGGATGAAAAGTGGTGCTGGGGATCGAGCCACTAACATTCCCCAAGGTAATAGCAGTTCAAGATCAGAATGGCTGGGTGAAACTGAGCAGGAGAGGGTGAGAATCATAAGGGAGTGGGTACAATTGAGTAGCCAGCAGAGAGTTATTGCTTCTGGGGACAACAGGGAAGAACAATCAGCTGAAATTGGTACCCAAATAGAACGAGTTCGTGATGGGTTTGCTGTTAATCAGAGTGAGGGTCAAACAGAGCATATGCGAAGGGGTATTCGTAAATTGTGTGGCAGACAGGTCCTGCTTGATATGCTTAAGAAGGCTGAGAGGGAAAGACAAAGAGAAGTTCAGGAATTATTGGACCATAGAGCTGTATCTCATTTTCCCCATCGCAACCGCATTCAGGCATTTCTCAGGGGTAGGTTCTTGAGAAACGACAGATCGATTGATGTTAACCGGCCCACTTCCATAGCTGAAAGTGAATTAGGCTTACTGAGGCAAAAACAGACTGTATCAGGTCTAAGGGAAGGGTTTTTCTCTGGGAAGGACAATTCTAGTGGAAGTCAAGTAATTTGCGCTCTGTCAGATACCTCATCCAACAGTGGCATTGATGATAATTCAAACGAGCAAACTGACTCCAGCAGCTTACCTTTGGTCTCAATTGTACATTTTGAACAGTCTGAACCTACCGTTGGAGGAAGTGATGGAGTTGGGATTGTAGATGGTCAGAGTTTTACTCAAGTAACCATTACGGAAGATTTAGATTGTCAAGACCCCGCTGCTGATATAGGAGGGTCATCACAGCTTTTGGAATTTGAGTCAAGAGATTGCCAATCATCATCCAGTACTGGGATGAGAAGAAGAGATGATAGTGGGCAATATGTTGTTGTGATGGGAGTTGAAGATACCATTGATGGACTCATGCAACAGAGTTGTCAGATTGAAGTTACAGAATATAGCAACATGCAGGGATCTAGTGAGGTATATCCTGAGGAATCGGAGCCGAGGGTCACAAGCAATGATGATAATGGTTTATCAGCTTCTAGTGATGTTATGGAAGCCACTATGGTAGATGATGAAAATAGGTATGACTCTACTGCTCTGGAAGAACATCAGCAGGAAGAAATTATTGAAAATGAAGGAAGTGATGAATCCCTGAGAAATGGCTTAGAGGGAAGTCTAGATGATAATCGTCCTGGTGGTACAGCCAATGAGTGGCCTCAAGACATTTTGGGCAATGAAGATGGGGAAAATTCTCATCTACCAGAAGCCCCAGAAATGTGGCAGGAGGATGGTGGCTTTCAGGAGGCTGTGGAAAATTGGTTGGGTGGACCTTCTGATCATGAAGTTGCTCCAGTTGGTAGAATACATGGCTTTTACTTTCCAGATGATGACAATGTGAACAGCGTGGAACTCAGGGAACTGCTAAATAGGAGAAGTGTTTCCAACCTCCTTGGCAGCAGTTTTCGCGAAAGTCTTGACCAGTTGATACAATCATATGTTGAAAGGCAAGGTCATGCTCATGTTGAGTGGGAGCTGCAAGAAACAACTCCTTCTTCTGCCTCAGTTGAACAGGACCTGGAGCAGCCGCGTAGGGATCAGATTGTTGGTCAGGAGGATACCATCAACATTCCACTTGACCAACCTTCATCACCAACACCTCCTGAGCCTCTCTGGGAACGACATTCCAATCATGACAATTGGCCGCGAGCTGAGATGAATAATCAGCATCCAGGAATTGGGCATTCATTTTCTTTGGAGTGGGAGATTATCAATGACTTGAGAATTGACATGGCTAGGCTACAGCAAAGAATGAATAATATGCAGAGAATGTTGGAGGCCTGTATGGATATGCAGCTTGAGTTGCAGCGCTCAATAAGACAGGAAGTTTCTGCAGCCCTAAATCGCTCAGCTGGTTCATCAGATATGCATGACCATGATTCACCCGATGTAAAGTCTAAATGGGAATGCGTAAGAAAAGGACTATGTTGTATATGCCGCGCAAGCAATATTGATTCTTTGTTGTACAGATGCGGGCACATGTGCACTTGTTCAAAATGTGCCAATGAGCTGTTCCAAAGTAGAAGAAAGTGTCCAATGTGTCAAGCGCCTGTGGTGGAGGTGATACGTGCTTATTCTATACTATAA 2667 0.4454 MQWGRILADMKRPVSIGTPLILPAKYANFSALDSDGCKRSVCSLKGDSHSQSPRRRGDGGSGSTRSSSILQTWREIEDEHVVGQVQGRPSDELLQQRSDEFITDLSQASIPGSHETGERHVVEDSILGENDCETWSQSQSQLESPDEQDELNNSSCDNSSDLGEIERERVRQIFREWMKSGAGDRATNIPQGNSSSRSEWLGETEQERVRIIREWVQLSSQQRVIASGDNREEQSAEIGTQIERVRDGFAVNQSEGQTEHMRRGIRKLCGRQVLLDMLKKAERERQREVQELLDHRAVSHFPHRNRIQAFLRGRFLRNDRSIDVNRPTSIAESELGLLRQKQTVSGLREGFFSGKDNSSGSQVICALSDTSSNSGIDDNSNEQTDSSSLPLVSIVHFEQSEPTVGGSDGVGIVDGQSFTQVTITEDLDCQDPAADIGGSSQLLEFESRDCQSSSSTGMRRRDDSGQYVVVMGVEDTIDGLMQQSCQIEVTEYSNMQGSSEVYPEESEPRVTSNDDNGLSASSDVMEATMVDDENRYDSTALEEHQQEEIIENEGSDESLRNGLEGSLDDNRPGGTANEWPQDILGNEDGENSHLPEAPEMWQEDGGFQEAVENWLGGPSDHEVAPVGRIHGFYFPDDDNVNSVELRELLNRRSVSNLLGSSFRESLDQLIQSYVERQGHAHVEWELQETTPSSASVEQDLEQPRRDQIVGQEDTINIPLDQPSSPTPPEPLWERHSNHDNWPRAEMNNQHPGIGHSFSLEWEIINDLRIDMARLQQRMNNMQRMLEACMDMQLELQRSIRQEVSAALNRSAGSSDMHDHDSPDVKSKWECVRKGLCCICRASNIDSLLYRCGHMCTCSKCANELFQSRRKCPMCQAPVVEVIRAYSIL 888
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci7g2461 888 MobiDBLite consensus disorder prediction 132 162 - -
Prci7g2461 888 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 812 886 IPR013083 -
Prci7g2461 888 MobiDBLite consensus disorder prediction 186 200 - -
Prci7g2461 888 Coils Coil 764 791 - -
Prci7g2461 888 MobiDBLite consensus disorder prediction 495 523 - -
Prci7g2461 888 ProSiteProfiles Zinc finger RING-type profile. 836 875 IPR001841 -
Prci7g2461 888 Pfam Zinc finger, C3HC4 type (RING finger) 833 880 - -
Prci7g2461 888 CDD mRING-HC-C3HC5_NEU1 836 885 - -
Prci7g2461 888 MobiDBLite consensus disorder prediction 713 739 - -
Prci7g2461 888 MobiDBLite consensus disorder prediction 540 598 - -
Prci7g2461 888 MobiDBLite consensus disorder prediction 43 67 - -
Prci7g2461 888 MobiDBLite consensus disorder prediction 132 160 - -
Prci7g2461 888 MobiDBLite consensus disorder prediction 540 564 - -
Prci7g2461 888 PANTHER RING/U-BOX SUPERFAMILY PROTEIN 28 888 - -
Prci7g2461 888 Coils Coil 271 298 - -
Prci7g2461 888 SUPERFAMILY RING/U-box 835 881 - -
Prci7g2461 888 MobiDBLite consensus disorder prediction 181 201 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci7g2461 Prci-Chr7 37242437 37247226 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci7g2461 836 882 C3H Transcription Factor Family AT3G06140 40.426 2.01e-06 49.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci7g2461 - - pcin:129315785 1746.48