Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci7g2448 ATGCCTCGCCGCGGAGGCCGAAAGCAACCCGAAGCTCGCCCGCATCAATCGTCTCCTGCCCCGTCCCAATCTACCCGGGGTCGGGGTGTTGCTCGAGGCGGGCCGCAAGAGGGACCGGGACTCGGCGCTGCCCCTGTATCGGTGACGTCTGCTCCTCCGGCTCCGGCCATTGCTCCAGACGCTCCGAGTGATGAGTTGGGGCGGCTAACATTGCAGTCTCCGGCGCCCTCATCGTCAAAGGCCTCGAGATTTGCCGACCGACCTGATTTTGGCAGGATAGGGAAGAAAATACGAGTTCGTGCAAATCACATTCTCGTTAATGTTGCTGACAATGATCTTCACCAGTACGATGTATCCATAACGCCAGAAGTTACTTCGAAAAAGATCAATAGAAATGTGATGAATCAACTAGTCCAGTTGTACCGAGAGTCACACTTGGGCAAGCGTATACCAGCTTATGATGGCCGGAAGAGTCTTTTCACAGCAGGCCCTTTGCCCTTTGACTCAAAAGAATTTGTGGTCAAGTTGGTAGACAGCGAAGAACCCGATGATTCTTCTGGTTCAACGAGGAAAAAACGTGAGCGCCAGTTTAAAGTCACGGTTCGTTATGCTTCTAAGGCTGATCTCCATCATCTGTGGCAGTTTCTAAGACGTCTACAGCTGGACAATCCACAAGAAACTATTCAAGCACTTGATGTGGTGCTGAGGGCATCGCCATCTGAAAAGTATACTGTGGTCGGGAGATCTTTTTTTTCACCTAGTTTGGGTCAACCTGGCGAACTTGGTGATGGGATAGAATACTGGAGAGGATATCATCAAAGCCTTCGCCCGACCCAGATGGGACTTTCCCTTAACATTGATGTATCAGCAAGGGCATTTTATGAAAACATTTTTGTGACTGAATTTATTGCAAAGCACTATAGTTTTAATTTTTCAAGGCCTCTGTCTGATCAAGAAAGAATCAAGGTTAAGAAAGCTTTGAGAGGAGTTAAGGTGGAATTTACTAATGGTCAGTGTACTCGAAGTTACAAAATAACTGGTGTCTCAAGGGAACCACTGGGCGAGTTGAAGTTTACTCTCGATGACCAGAGAACAAAAATAACCGTTGTTCGATATTTTCGTGAGAAATACAATGTTGAGCTCAAGTGTTTGGCCCTTCCTGCCCTCCAAGCCGGGAGTGACACAAAACCTATTTATTTGCCCATGGAGCTTTGCAAGATAGCTGCTGGCCAACGGTACTCAAGGAAACTGAATGAGAAGCAAGTAACTGCACTTTTGAGAGCAACCTGTCAACGACCATTTGACAGGGAGAAGGACATTAGAGAGATGGTAAGACGTAACAGTTTCAACAGAGACAAGTTTGTGCGTGAATTTGGAATTCAAGCGAGTGAAGAATTAGCATTGTGTGACGCACGTGTTTTGCCTCCTCCAAGGCTCAAATATCATGAAACTGGGAAGGAAACAATGGTTGAACCGTATAGGGGTCAGTGGAATATGATAAACAAGAAAATGATAGATGGTGGGAACGTGCAACATTGGACTTGTTTAAGCTTTTCTACTAGAGTGAGCAGAGATTTGCCTTTTCAATTTTGTAATGAGTTGGTAAATATGTGCACCAGCAAGGGAATGGTTTTCAATCGAACCCCTTTACTTCCTATAAGGTCAGTTCATCCTAGTCACATTGAGGGGGCTCTTAGAGATGTTAGCAAGCAATCTAGCAAGAAGCTTCAGCTGTTGATTATAATCTTGCCTGACATTAAAGGTTCTTATGCAAAGATTAAACGCATTTGTGAAACAGAATTGGGAATAGTGTCTCAATGCTCTCAGCCCAGGGAAGCTTCAAGGCTACAAAAGCAATATCTTGAAAATTTGGCCCTCAAGATCAATGTTAAGGTTGGGGGGCGCAATACAGTGTTAATGGATGCAATTCAGAGAAGAATTCCTCATGTGACTGATCGCCCTACTATAATATTTGGTGCGGATGTAACACATCCACAGCCAGGGGAGGACTCGAGCCCTTCTATAGCAGCTGTAGTAGCTTCCATGGATTGGCCTGAGGTCACTAAGTACCGCGGAATTGTTTCTGCCCAGTCACACCGTGAAGAAATTATTCTAGATCTTCATAGAACTTCTCAGGAACCTGGTAGGGGAGTTGTACAGGGTGGAATGATTAGAGAGCTACTTGTTGCATTCTTTAGATCAACCAGATTGAAGCCAGACAGGATTATATTCTACAGAGATGGAGTTAGTGAAGGCCAATTCAGTCAGGTTTTACTTCATGAAATGGAAGCTATAAGAAAGGCTTGTGCCTCGTTAGAGGAAGGATATCTGCCAAAAGTAACCTTCTTGGTGGTACAGAAAAGACATCACACCCGTTTTTTTCCTGATCATAATAATCGCGATCAGACTGATAAAAGCGGAAATATTTTGCCAGGCACTGTTGTCGATACTCAGGTTTGCCATCCCAGAGAATTTGACTTTTACCTCAACAGCCATGCTGGCATTAAGGGAACAAGCCGACCTACGCATTATCATGTACTATTTGATGAGAACAACTTCAAGGCTGATGAGCTGCAGACTTTAACAAACAACTTGTGTTACACATATGCAAGGTGCACTAGATCGGTGTCAATAGTTCCTCCCGCTTATTATGCCCATTTGGCTGCTTTCCGTGCTCGCTACTACATTGAAGGCGAGACATCGGATGTTGATGCTTCAAGTGGAACAGGAAGTAGGAGCACTAACGTTGTGGTAACTCTTCCGACAATCAAGGACAATGTCAACGTCATGTTTTACTGCTAA 2802 0.4497 MPRRGGRKQPEARPHQSSPAPSQSTRGRGVARGGPQEGPGLGAAPVSVTSAPPAPAIAPDAPSDELGRLTLQSPAPSSSKASRFADRPDFGRIGKKIRVRANHILVNVADNDLHQYDVSITPEVTSKKINRNVMNQLVQLYRESHLGKRIPAYDGRKSLFTAGPLPFDSKEFVVKLVDSEEPDDSSGSTRKKRERQFKVTVRYASKADLHHLWQFLRRLQLDNPQETIQALDVVLRASPSEKYTVVGRSFFSPSLGQPGELGDGIEYWRGYHQSLRPTQMGLSLNIDVSARAFYENIFVTEFIAKHYSFNFSRPLSDQERIKVKKALRGVKVEFTNGQCTRSYKITGVSREPLGELKFTLDDQRTKITVVRYFREKYNVELKCLALPALQAGSDTKPIYLPMELCKIAAGQRYSRKLNEKQVTALLRATCQRPFDREKDIREMVRRNSFNRDKFVREFGIQASEELALCDARVLPPPRLKYHETGKETMVEPYRGQWNMINKKMIDGGNVQHWTCLSFSTRVSRDLPFQFCNELVNMCTSKGMVFNRTPLLPIRSVHPSHIEGALRDVSKQSSKKLQLLIIILPDIKGSYAKIKRICETELGIVSQCSQPREASRLQKQYLENLALKINVKVGGRNTVLMDAIQRRIPHVTDRPTIIFGADVTHPQPGEDSSPSIAAVVASMDWPEVTKYRGIVSAQSHREEIILDLHRTSQEPGRGVVQGGMIRELLVAFFRSTRLKPDRIIFYRDGVSEGQFSQVLLHEMEAIRKACASLEEGYLPKVTFLVVQKRHHTRFFPDHNNRDQTDKSGNILPGTVVDTQVCHPREFDFYLNSHAGIKGTSRPTHYHVLFDENNFKADELQTLTNNLCYTYARCTRSVSIVPPAYYAHLAAFRARYYIEGETSDVDASSGTGSRSTNVVVTLPTIKDNVKXVMFYC 934
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci7g2448 934 SMART DUF1785_2 244 296 IPR014811 -
Prci7g2448 934 ProSiteProfiles Piwi domain profile. 578 897 IPR003165 GO:0003676
Prci7g2448 934 Gene3D paz domain 291 413 - -
Prci7g2448 934 Pfam N-terminal domain of argonaute 95 235 IPR032474 -
Prci7g2448 934 Gene3D - 646 934 IPR036397 GO:0003676
Prci7g2448 934 ProSiteProfiles PAZ domain profile. 297 409 IPR003100 GO:0005515
Prci7g2448 934 Pfam Mid domain of argonaute 492 570 IPR032473 -
Prci7g2448 934 FunFam protein argonaute 10-like 646 934 - -
Prci7g2448 934 FunFam Argonaute 10 473 640 - -
Prci7g2448 934 Pfam PAZ domain 322 425 IPR003100 GO:0005515
Prci7g2448 934 SUPERFAMILY Ribonuclease H-like 568 897 IPR012337 -
Prci7g2448 934 CDD PAZ_argonaute_like 299 408 - -
Prci7g2448 934 Gene3D - 473 640 - -
Prci7g2448 934 Pfam Argonaute linker 2 domain 435 481 IPR032472 -
Prci7g2448 934 SMART PAZ_2_a_3 297 431 IPR003100 GO:0005515
Prci7g2448 934 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 2C 77 898 - -
Prci7g2448 934 MobiDBLite consensus disorder prediction 1 87 - -
Prci7g2448 934 Pfam Argonaute linker 1 domain 246 295 IPR014811 -
Prci7g2448 934 SUPERFAMILY PAZ domain 97 450 IPR036085 GO:0005515
Prci7g2448 934 CDD Piwi_ago-like 453 896 IPR045246 -
Prci7g2448 934 SMART Piwi_a_2 578 897 IPR003165 GO:0003676
Prci7g2448 934 Pfam Piwi domain 580 896 IPR003165 GO:0003676
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci7g2448 Prci-Chr7 37118967 37125498 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci7g2448 74 934 Eukaryotic Initiation Factors Gene Family AT1G48410 59.752 0.0 1077
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci7g2448 K11593 - qsa:O6P43_028455 1297.72