Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci7g2446 ATGGCGGAGGACCGCAACGGCGATGATAAGAATGAAAACAGTGACTACAGTTCAGAGGATGAAGGAACTGAAGATTACAGGCGTGGAGGTTACCATGCGGTTCGAATTGGTGATACTTTCAATAATGGGTGCTATGTGGTGCAGGCCAAGCTTGGTTGGGGTCATTTTTCTACCGTGTGGCTTGCTTGGGACATCCAGAGATCGCGTTACGTGGCCTTAAAAATTCAAAAGAGTGCTCAGCACTATGCTGAAGCTGCCATGGATGAAATAAAGATTCTTAAACAGATTGCAGAGGGGGACCCAGATGACAAGAAATGTGTTGTAAAGCTTTGGGATCACTTCAAGCATTCTGGTCCTAATGGTCAGCATGTATGTATGGTATTTGAATTTCTGGGTGACAATCTGCTGACACTTATCAAGTATAGTGATTACCGAGGGGTTCCGCTAGCCATGGTTAAAGAAATATGTTACCATATTTTGGTGGGCTTGGATTACTTGCACCGAGAGCTTTCCATAATACATACAGATCTGAAGCCAGAGAATGTCTTGCTTTTGTCTATGATAGATTCGTGTAAGGATCACAGAAAGTCAGGTGCCCCACTAATCCTTCCTAGCACCAAGGACAATTCTGTATCCAAGAATGAGGTCACAAAAGATAATGTTAGTTCGAATGGAAATCTGACCAACAACCAAAAAAAGAAAATGCTTAGAACGGCTAAGGTTGAGAATGAAATTATTGAGGAGACTGAAAGTTCTAAAGAACACGTTCAAGAAGTTTATAGCAATGATCAAAAGTCAAATGCTGAATCTGTTGAAGATAAACCCAGTAGTTCAGGGAGTAAAGATGAACCAACAAAGATTGTTGAAACTAAGGATGTTCCGCAAGGAAGTCATAGTCGGAGGAAAAGTAGCCGTTCCTTAAGAAAAAAGTTGCTTGCAACTGTTGATCTAAAGTGTAAACTGGTTGATTTTGGAAATGCATGTTGGACTTATAAACAGTTCACAAATGATATTCAAACAAGGCAGTATAGGTGTCCTGAGGTTATTCTTGGATCTAAATACTCAACTCCAGCGGATTTATGGTCTTTTGCTTGCATTTGCTTTGAGTTGGCCACTGGTGATGTTCTTTTTGATCCTCACAGCGGTGACAACTATGATAGGGACGAGGATCATCTGGCACTGATGATGGAACTTCTTGGAATGATGCCTCGCAAGATTGCACTAGGTGGCCGCTATTCCCGGGAATTTTTTAATAGGTATGGTGATCTAAGGCACATCCGTCGGTTGCGGTTCTGGCCTCTGAATAAGGTGCTTATGGAAAAGTATAATTTCAGTGAACAAGACGCAAAAGACATGACAAACTTCCTCGTTCACATACTTGATTTTGTCCCCGAAAATAGGCCAACAGCTGCTCAGTGTCTTACTCATACCTGGTTCAATGCTGGTCCTCGGATTCTACGGCCTTCTGCGACTACAGTACAACCTGAGGCCATTGGAAGGGGAATTTCTGAAGAAGCAAAGCGGGATAAGGCTGAGCAGGAAGCAGTGGAAGTTGGTGTGGGCAATATAGCCATCGATGGAACACCAAAGCCACTTAAAAAGTCCCAATCTGTTAATTGA 1620 0.4259 MAEDRNGDDKNENSDYSSEDEGTEDYRRGGYHAVRIGDTFNNGCYVVQAKLGWGHFSTVWLAWDIQRSRYVALKIQKSAQHYAEAAMDEIKILKQIAEGDPDDKKCVVKLWDHFKHSGPNGQHVCMVFEFLGDNLLTLIKYSDYRGVPLAMVKEICYHILVGLDYLHRELSIIHTDLKPENVLLLSMIDSCKDHRKSGAPLILPSTKDNSVSKNEVTKDNVSSNGNLTNNQKKKMLRTAKVENEIIEETESSKEHVQEVYSNDQKSNAESVEDKPSSSGSKDEPTKIVETKDVPQGSHSRRKSSRSLRKKLLATVDLKCKLVDFGNACWTYKQFTNDIQTRQYRCPEVILGSKYSTPADLWSFACICFELATGDVLFDPHSGDNYDRDEDHLALMMELLGMMPRKIALGGRYSREFFNRYGDLRHIRRLRFWPLNKVLMEKYNFSEQDAKDMTNFLVHILDFVPENRPTAAQCLTHTWFNAGPRILRPSATTVQPEAIGRGISEEAKRDKAEQEAVEVGVGNIAIDGTPKPLKKSQSVN 539
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci7g2446 539 PANTHER PROTEIN KINASE DOMAIN-CONTAINING PROTEIN-RELATED 10 504 - -
Prci7g2446 539 SUPERFAMILY Protein kinase-like (PK-like) 40 488 IPR011009 -
Prci7g2446 539 Gene3D Phosphorylase Kinase; domain 1 21 127 - -
Prci7g2446 539 MobiDBLite consensus disorder prediction 1 24 - -
Prci7g2446 539 ProSitePatterns Serine/Threonine protein kinases active-site signature. 172 184 IPR008271 GO:0004672|GO:0006468
Prci7g2446 539 ProSitePatterns Protein kinases ATP-binding region signature. 51 74 IPR017441 GO:0005524
Prci7g2446 539 MobiDBLite consensus disorder prediction 199 235 - -
Prci7g2446 539 FunFam CMGC/SRPK protein kinase 31 130 - -
Prci7g2446 539 MobiDBLite consensus disorder prediction 267 299 - -
Prci7g2446 539 SMART serkin_6 45 479 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci7g2446 539 FunFam Serine/threonine-protein kinase SRPK-like protein 309 479 - -
Prci7g2446 539 Gene3D Transferase(Phosphotransferase) domain 1 128 480 - -
Prci7g2446 539 MobiDBLite consensus disorder prediction 247 305 - -
Prci7g2446 539 ProSiteProfiles Protein kinase domain profile. 45 479 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci7g2446 539 CDD STKc_SRPK 34 479 - -
Prci7g2446 539 Pfam Protein kinase domain 45 185 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci7g2446 539 Pfam Protein kinase domain 315 479 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci7g2446 539 MobiDBLite consensus disorder prediction 203 234 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci7g2446 Prci-Chr7 37098394 37101580 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci7g2446 1 530 EF-hand Containing Proteins AT5G22840 66.854 0.0 731
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_SRPK Prci7g2446 Pkinase 4.2e-20 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci7g2446 K08832 - gmx:100791829 839.336
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Prci7g2446 7 37098394 37101580 Prci7g2446 7 37098394 37101580 ECH