Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci7g2425 ATGGAGTTCTGGGGTGTTGAGGTTAAGACTGGGGAGCCTGTTAAAGTTGATCCTCAAGATTTTGATGCCTACATACATCTTTCTCAGGCTGCTCTCGGTGAGACGAAGAAGGACAAGGGAGCTGAACCTGTGGTTCTTTACTTAAAATTTGATGACCAGAAATTTGTTTTGGGAACCCTTTCAAGGGATAATTTCCCCCAGATATCGTTTGACTTAGTTCTGGAAAAGGAGTTTGAGCTCTCCCACAATTCAAAAAATGGGAGCGTCTTTTTCTGTGGATATAAAGCTGAGCTTCCTGATGAAGGGGGTGATGACTTTGACGACTTATCTGACAGTGAAGAGGATGTGGATGTCCCAGTGATAACAAAAGACAATGGAAAACCTGATACTAAGGTTGCTGCATTGAAAAGAAATGATGCAGTTAATGATGTCAAAAAGCAAGGCAAGGTTGATCCAAAGAAGGATGAAGATGATGATGATTCTGAAGATAATGAGGATGATGAATCTGATGATGAAGGAGGTTCTGATGAGGATATGATGGATGCTGATAGCGATAGTGATGATGAGAGCGAGGATGATGGAGATGATGAGGAGACTCCCAAGAAGAAGGTGGATCTGAGCAAGAAGAGACCCAATAATTCTGCATCCAAAACTCCAGTTTCTGCCAAGAAAGCTAAATCTGGTACTCCTGAAAAGAGTGATGCTAAAAAAGGTGGTCATACCGCAACTCCTCACCCAATGAAGAAGGGGGGAAAAACTCCTAACAGTGAAGCCAAGGAGCCCAAGTCTGGCGGGCAATTGTCCTGCAAATCTTGCAACAAGTCTTTCAACTCTGAAAGTGGTCTGCAACAGCATAACAAGGCCAAGCATGGTGGTCAGTGA 882 0.4342 MEFWGVEVKTGEPVKVDPQDFDAYIHLSQAALGETKKDKGAEPVVLYLKFDDQKFVLGTLSRDNFPQISFDLVLEKEFELSHNSKNGSVFFCGYKAELPDEGGDDFDDLSDSEEDVDVPVITKDNGKPDTKVAALKRNDAVNDVKKQGKVDPKKDEDDDDSEDNEDDESDDEGGSDEDMMDADSDSDDESEDDGDDEETPKKKVDLSKKRPNNSASKTPVSAKKAKSGTPEKSDAKKGGHTATPHPMKKGGKTPNSEAKEPKSGGQLSCKSCNKSFNSESGLQQHNKAKHGGQ 293
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci7g2425 293 Pfam Nucleoplasmin-like domain 3 94 IPR041232 -
Prci7g2425 293 MobiDBLite consensus disorder prediction 102 293 - -
Prci7g2425 293 Gene3D Nucleoplasmin core domain 1 100 - -
Prci7g2425 293 MobiDBLite consensus disorder prediction 196 210 - -
Prci7g2425 293 FunFam Histone deacetylase HDT1 1 100 - -
Prci7g2425 293 ProSitePatterns Zinc finger C2H2 type domain signature. 269 290 IPR013087 -
Prci7g2425 293 MobiDBLite consensus disorder prediction 259 287 - -
Prci7g2425 293 ProSiteProfiles Zinc finger C2H2 type domain profile. 267 293 IPR013087 -
Prci7g2425 293 Pfam Zinc-finger of C2H2 type 268 287 - -
Prci7g2425 293 SUPERFAMILY beta-beta-alpha zinc fingers 250 289 IPR036236 -
Prci7g2425 293 MobiDBLite consensus disorder prediction 116 155 - -
Prci7g2425 293 MobiDBLite consensus disorder prediction 227 241 - -
Prci7g2425 293 MobiDBLite consensus disorder prediction 156 195 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci7g2425 Prci-Chr7 36987938 36990885 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci7g2425 1 108 C2H2 Transcription Factor Family AT5G03740 50.926 6.87e-32 118
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Prci7g2425 NPL 1.1e-12 CL0055
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci7g2425 - - gmx:100795506 325.094
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Prci7g2425 7 36987938 36990885 Prci6g0552 6 3610364 3613588 CCT
Prci7g2425 7 36987938 36990885 Prci7g2425 7 36987938 36990885 ECH