Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci7g2417 ATGAAAAGTGGCTGTTCCACGTGCGACCTCGAACATGATCAGAGGCGGACGCATGGATTGGTTAGCCCTACCACAGGACGTGTAACACGTTTTTCTTCTCGGGGATCCATTATTTATACAGCCTCCTCGACCGGACGTACAGGGGGCGGGGCCAATACCAGCAGATCGACCATGCACCACAAGAGGAAAGCCGGAAGAAGAAAGTTCAAGGAGACGAGGCACCCCGTGTACAGGGGCGTCCGACGAAGAAACGGCAACAAATGGGTCTGTGAAGTGCGCCAGCCCAACAACAAGTCTCGCATCTGGTTAGGCACTTACCCCACTCCTGAGATGGCCGCCACCGCCCACGACTCTGCCGTCCTCTCTCTCAGAGGCTCCTCTGCCCTTCTCAACTTCCCCGATTCTGCTCCTCTTCTTCCTCTCGCCCCCTCTTCTTCTCCTTCTGACATCAGAGCCGCCGCCGCCAAAGCTGCTGCTAAGAATATCATGAACAATGAAGAGGCAGGGACCATGTTCGTGGACGAGGAAGCGCTCTATAATATGCCTGCACTGTTGGACAGCATGGCCGAGGGTCTTCTTCTTACCCCGCCTTCCATGAGCAGAGCATTCATGGAGGACACCATTGCTCCTTATTCTCGTGACTTGGACCTCAATTTGTGGACACACTAG 669 0.5486 MKSGCSTCDLEHDQRRTHGLVSPTTGRVTRFSSRGSIIYTASSTGRTGGGANTSRSTMHHKRKAGRRKFKETRHPVYRGVRRRNGNKWVCEVRQPNNKSRIWLGTYPTPEMAATAHDSAVLSLRGSSALLNFPDSAPLLPLAPSSSPSDIRAAAAKAAAKNIMNNEEAGTMFVDEEALYNMPALLDSMAEGLLLTPPSMSRAFMEDTIAPYSRDLDLNLWTH 222
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci7g2417 222 Gene3D AP2/ERF domain 76 134 IPR036955 GO:0003700|GO:0006355
Prci7g2417 222 PRINTS Ethylene responsive element binding protein signature 77 88 IPR001471 GO:0003700|GO:0006355
Prci7g2417 222 PRINTS Ethylene responsive element binding protein signature 99 115 IPR001471 GO:0003700|GO:0006355
Prci7g2417 222 Pfam AP2 domain 75 125 IPR001471 GO:0003700|GO:0006355
Prci7g2417 222 PANTHER DEHYDRATION-RESPONSIVE ELEMENT-BINDING PROTEIN 1D 52 220 IPR045277 GO:0003700
Prci7g2417 222 MobiDBLite consensus disorder prediction 39 55 - -
Prci7g2417 222 MobiDBLite consensus disorder prediction 39 69 - -
Prci7g2417 222 SMART rav1_2 76 139 IPR001471 GO:0003700|GO:0006355
Prci7g2417 222 SUPERFAMILY DNA-binding domain 76 135 IPR016177 GO:0003677
Prci7g2417 222 FunFam Ethylene-responsive transcription factor 2 75 134 - -
Prci7g2417 222 ProSiteProfiles AP2/ERF domain profile. 76 133 IPR001471 GO:0003700|GO:0006355
Prci7g2417 222 CDD AP2 77 135 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci7g2417 Prci-Chr7 36923551 36924389 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci7g2417 61 199 AP2-EREBP Transcription Factor Family AT5G51990 47.305 2.71e-49 159
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2 or ERF-ERF Prci7g2417 AP2 6.8e-13 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci7g2417 - - pcin:129316807 429.098