Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci7g2416 ATGGACGACTCCAAGGCGCTCGGAACTTTCAACCCTAGTAGCGATGGAGCAAAAGCAAAGAAGCCGAAGGTGGTAGTGATAATGGGTCCCACTGGCTCTGGGAAGTCCAAGCTTGCCATTGATTTGGCTTCCCACTTCCCGGTCGAAGCTATCAACGCTGATTCCATGCAGGTTTACCGAGGCCTGGATGTTCTCACCAACAAAGTTCCGCTCTCCGACCAAAAGGGGGTGCCTCACCATCTTCTGGGTACTGTAAGTCCAAACGTTGAATTTACAGCTAAAGACTTTCGAGATTCTGCTATCCCTCTCATCAATGACATCTGTGCTCGCAACTGCTTGCCCGTCATAGTTGGGGGCACGAATTATTACATCCAGGCTCTTGTGAGTCCGTTCCTTCTAGATGAGTCAGTTGAAGATATGGATGAAACCTTTATGGACAACCTTTCCGGTACTAGACCATTGGATAAGTATTTCATCCCTGAAAAGGACAGTTCAGACAATAATTATGAATTGCTTAAAGATGTTGATCCAGTTGCAGCAAATAGAATGCATCCAAATAACCATAGAAAGATTAGTCAATACCTTAGCTTGTATGCTCGCACTGGAGTTCTTCCTAGCAAAATTTTCCAAGGAAAAGCTGCAGAGAAGTGGGGTCAAGTTGGTAACTTGAGATATGATTGCTGTTTTATATGTGTGGATGCATCTCTTCCTGTACTGGATAGATATGTAGAACAGAGGGTAGATTGCATGATGGATGCTGGATTACTTAATGAAGTCTATGACATTTACAATCCAAATGCTGATTATAGTCGTGGCTTGCGGCAAGCCATTGGTGTCCGTGAATTTGAGCCTCTTCTGGGAACCCTTGTATTTGAAGAAATCTACAAAAGAGAGAAAGAATCGTCCGAGGATTCCAGGAGAGAAAAGTGTGATAAATTGTCTGATGATGATCTGAGGGGTCTCTTGAAGTTGTCTTCTGACACAAAAGCCATTACACTTAGGGAAGAAGCAATTGAAAAAGTAAAGGTTAACACACAGAGACTAGTTCGCCGTCAGAAGAGGATGCTTAATCGACTGCAAAAATTGTTTGATTGGAATATTCACTACGTGGATTCCACAGAATCATTATCAAGTAAATCAGATGATATATGGACTGGCCAAGTGGTAGAACCTGCGGTGAAGATCGTTAGATCTTTCCTTGGCCAGAATGAGAACTTGTCATCCACGTCAGGGACGTCGAATAGCGGTGGGATGAAGATGGTTGAAAGGGACCTCTGGACTCAATACATATGCAAGGCCTGTGGGGATAGGGTGCTTAGAGGGATTCATGAGTGGGAACAACACAAACAGGGACGTGGACACCGGAAACGTATTTCTAGCCTCAAGAACAAATCACGAGGCCTCTGTTCGGCGGAACAATAG 1422 0.443 MDDSKALGTFNPSSDGAKAKKPKVVVIMGPTGSGKSKLAIDLASHFPVEAINADSMQVYRGLDVLTNKVPLSDQKGVPHHLLGTVSPNVEFTAKDFRDSAIPLINDICARNCLPVIVGGTNYYIQALVSPFLLDESVEDMDETFMDNLSGTRPLDKYFIPEKDSSDNNYELLKDVDPVAANRMHPNNHRKISQYLSLYARTGVLPSKIFQGKAAEKWGQVGNLRYDCCFICVDASLPVLDRYVEQRVDCMMDAGLLNEVYDIYNPNADYSRGLRQAIGVREFEPLLGTLVFEEIYKREKESSEDSRREKCDKLSDDDLRGLLKLSSDTKAITLREEAIEKVKVNTQRLVRRQKRMLNRLQKLFDWNIHYVDSTESLSSKSDDIWTGQVVEPAVKIVRSFLGQNENLSSTSGTSNSGGMKMVERDLWTQYICKACGDRVLRGIHEWEQHKQGRGHRKRISSLKNKSRGLCSAEQ 473
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci7g2416 473 PANTHER TRNA DIMETHYLALLYLTRANSFERASE 21 400 IPR039657 -
Prci7g2416 473 Gene3D - 155 212 - -
Prci7g2416 473 Gene3D Classic Zinc Finger 425 466 - -
Prci7g2416 473 Pfam IPP transferase 57 354 - -
Prci7g2416 473 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 20 259 IPR027417 -
Prci7g2416 473 NCBIfam tRNA (adenosine(37)-N6)-dimethylallyltransferase MiaA 24 299 IPR018022 GO:0008033
Prci7g2416 473 FunFam tRNA dimethylallyltransferase 424 467 - -
Prci7g2416 473 Hamap tRNA dimethylallyltransferase [miaA]. 24 377 IPR018022 GO:0008033
Prci7g2416 473 Gene3D - 22 424 IPR027417 -
Prci7g2416 473 MobiDBLite consensus disorder prediction 451 473 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci7g2416 Prci-Chr7 36903268 36908793 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci7g2416 10 472 C2H2 Transcription Factor Family AT2G27760 56.632 0.0 513
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci7g2416 K00791 - gmx:100792690 666.381