Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci7g2410 ATGAAGGTGATCGCTGCGTATTTGCTGTCTGTATTGGGAGGGAACGCAGCACCTACAGCCGACGATCTGAAGTACATCCTAGGCTCAGTTGGAGCTGAGATTGATGATGAAAGGATTGATCTTCTTTTGTCCGAAGTTAATGGTAAAGATATCACCGAACTGATTGCTAGTGGAAGAGAGAAGCTGGCTTCAGTACCTGGCGGTGGTGGCGCAGTTGCTGTTGCTGCTGCGCCTACAGCTGGTGCTCCTGCTGGTGGTGCTGCGCCTGCCGCTGAGGCAAAGGAAGAAAAGAAGGTGGAAGAGAAGGAGGAGTCAGATGAGGACATGGGTTTCAGTTTATTCGACTGA 348 0.5086 MKVIAAYLLSVLGGNAAPTADDLKYILGSVGAEIDDERIDLLLSEVNGKDITELIASGREKLASVPGGGGAVAVAAAPTAGAPAGGAAPAAEAKEEKKVEEKEESDEDMGFSLFD 115
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci7g2410 115 Hamap 50S ribosomal protein L12 [rpl12]. 2 115 IPR027534 GO:0003735|GO:0005840|GO:0006414
Prci7g2410 115 Pfam 60s Acidic ribosomal protein 18 114 - -
Prci7g2410 115 MobiDBLite consensus disorder prediction 91 105 - -
Prci7g2410 115 PANTHER 60S ACIDIC RIBOSOMAL PROTEIN FAMILY MEMBER 1 115 IPR044076 GO:0002182|GO:0003735|GO:0022625
Prci7g2410 115 FunFam 60S acidic ribosomal protein P2 1 59 - -
Prci7g2410 115 MobiDBLite consensus disorder prediction 80 115 - -
Prci7g2410 115 CDD Ribosomal_P2 1 115 IPR044076 GO:0002182|GO:0003735|GO:0022625
Prci7g2410 115 Gene3D - 1 59 IPR038716 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci7g2410 Prci-Chr7 36863991 36865916 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci7g2410 1 115 Cytoplasmic Ribosomal Protein Gene Family AT3G44590 66.957 1.19e-31 106
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci7g2410 K02943 - nnu:104586918 124.405