Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci7g2409 ATGATTAGCGATAGCCGAAGATGGGACCGCAAAGACTCCCGCAGAGCCAAGAAGCAGAAGCTAATCCGCAACACTGAAGAAGAACTCGAGGCTAAATTAGGGTTCGATCTTTTCTCAGAGGGCGAAAAACGACTTGGATGGTTGCTGAATTTTTCTTCCTCATCTTGGGAGGATGAAGATACACACAAAGTCCATAGTTGTGTAGATCTTTATTTTGTGACGCAGGATGGTTCTATGTTCATCAAGTACAGATTTCAACCTTATTTCTACGTGGCTACAAAGGATAAAATGGAGATGGAAGTTGAAGCATATCTGAGACGGCGTTATGAACGTCAGATTGCAGATATTGAAATTAAAGAGAAGGAAGACCTTGATCTTAAAAATCATTTGTCTGGATTGCAAAAATCATATTTAAAGCTATGCTTTGACACTGTTCAACAATTGATGAATGTGAAGAGTGATCTGATGCATGTTGTTGAAAGAAATCAGGCAAAATCTGATGCAGCAGAAGCTTACGAATCCATATTAACTGGAAGAAGGGAGCAAAAACCTCAAGATTTTCTAGATTATATAATCGATCTTCGTGAATATGATGTTCCTTATCATGTTCGCTTTGCCATTGATAATGACATTCGATGTGGCCAATGGTATGATGTTTGTGTGTCCAATACTGGGGTTACACTTGAGAAGAGGACAGATCTTCTGCAGCGTGCTGAAGTTCGTATTTGTGCTTTTGATATAGAGACCACAAAACTTCCATTGAAGTTCCCTGATGCTGAATATGACTTAATTATGATGATTTCATACATGGTAGATGGGCAAGGGTATTTGCTCATAAATAGAGAGTGTGTTGGGGACAACATAGAGGATTTGGAATACACTCCAAAACCAGAGTTCGAAGGATGTTTTAAGGTGACAAATGTTCAAAATGAGGTTGAACTTCTTAGATTGTGGTTTTCTCATATGCAAGAGGTGAAACCTGGTATATATGTTACATACAACGGTGATTTCTTTGATTGGCCATTTGTGGAAAGAAGGGCAGCTCATCATGGGTTCAAAATGCGTGATGAGTTGGGTTTTCAATGTGACAATAGTCAAGGGGAATGTCGAGCTAAATTTGCCTGCCATCTAGATTGTTTTGCTTGGGTTAAACGTGACAGTTATCTTCCTCAGGGGAGCCAAGGCCTAAAGGCTGTTACAAAAGCAAAGTTGGGTTATGATCCCCTAGAGGTGAACCCTGAGGACATGGTTCGCTTTGCAAAGGAAAAACCTCAGATGATGGCCTCTTATTCCGTTTCTGATGCTGTGGCAACTTATTACTTGTATACAACCTATGTTCATCCCTTTATTTTTTCTCTTGCAACAATTATACCCATGTCACCAGATGAGGTTTTGCGTAAAGGTAGTGGGACCCTCTGTGAAATGTTGCTCATGGTTCAGGCATACAAGGCTAATGTGATCTGCCCTAACAAACACCAGTCTGATCGAGAGAAATTTTACAACAATCACCTTCTTGAGAGTGAGACATACATTGGTGGCCATGTGGAATGCCTTGAAAGTGGTGTATTTAGATCTGATCTTCCAACTAGTTTTACACTTGAACCTTCAGCATATGAGCAATTGATCAACAACCTTGATCGAGACCTGCAATATGCTATAAGAGTAGAGGGTAAGATGGACTTGGATTCCATCTCTAATTATGATGAAGTTAAGAATGCTATCATGGAAAAGCTTATAAAATTGCGAGACAAGCCAATATGTGAAGAATGCCCCCTCATTTATCATTTGGATGTAGCTGCTATGTATCCAAACATCATCTTAACAAACCGGCTTCAGCCACCTTCAATAGTTACAGATGAGGTCTGCACTGCATGTGATTTCAACCGTCCTGGAAAGACTTGCCTTCGAAAACTTGAGTGGGTTTGGCGTGGAGAAATTTTCATGGCAAAGAAAAGTGATTATTATCATTTAAAGAAGCAGATTGAGTCTGAGTTTGTTGAAAGTGCTGATAGGCAGTCATCTAAATCATTTCTTGACTTGCCCAAGCCAGAGCAGCAATCTAGGCTTAAAGAACGTCTAAAGAAATACTGCCAGAAGGCATATAAACGGGTACTTGATAAGCCAGTAACTGAACTTCGCGAAGCGGGGATCTGCATGCGTGAAAATCCATTTTATGTTGACACTGTTCGCAGTTTTCGGGATAGAAGATATGAATACAAAGGTCTTAATAAGGTTTGGAAGGGAAAGTTGTCAGAAGCCAAGGCCAGTGGAAATTCTATTAAGATCCAAGAGGCACAAGACATGGTTGTGCTTTATGATTCATTGCAACTTGCACACAAGTGCATACTGAATTCCTTTTATGGATATGTCATGCGCAAGGGAGCAAGATGGTATTCCATGGAAATGGCTGGGGTTGTTACATATACTGGTGCAAAAATCATTCAGAATGCTCGCTTGCTTGTAGAGAAAATAGGAAAGCCACTTGAATTAGACACGGATGGTATTTGGTGTGCACTTCCCGGCTCTTTTCCAGAAAATTTCACTTTTAAAACAAGAGACACAAAGAGGAAATTGACTATTTCATACCCTTGTGTCATGCTTAATGTTGATGTGGCAAGGAATAACACAAATGATCAGTACCAGACGCTCACTGATCCAGTTAGGAAAGCTTATACCACTCACAGCGAATGCTCTATTGAATTTGAAGTTGATGGACCATACAAGGCAATGATCCTTCCAGCTTCCAAAGAAGAAGGAATTCTAATTAAGAAGCGTTATGCTGTTTTTAATGATGATGGAACTCTAGCAGAGTTGAAAGGTTTTGAGATCAAGCGGAGAGGTGAACTGAAGCTAATAAAAGTTTTCCAGGCAGAACTTTTTGACAAGTTTCTTCATGGGTCAACCATAGAGGAATGCTATTCAGCTGTTGCTACTGTGGCAAACCGGTGGCTTGATCTTCTTGATAACCAAGGAAGGGATATTGCAGATAGTGAGTTACTTGATTATATATCAGAATCAAGTACCATGAGCAAGTCTTTAGCTGATTATGGTGAGCAGAAGTCTTGTGCTGTTACCACTGCTAGACGGCTTGCTGACTTTCTTGGTGATGCCATGGTCAAAGATAAAGGTCTCCGATGTCAGTACGTAGTAGCATGTGAACCTAAGGGAACACCTGTAAGTGAGCGTGCTGTTCCTGTGGCAATATTTGAAACTGATGCTGAAGTAATGAAGTTCTATGTCCGAAAATGGTGCAAGGTCTCAGCTGATGTTGGCATTCGATCCATAGTTGATTGGTCCTATTATAGGCAACGGCTGAGCTCTGCAATTCAAAAAATTATCACCATTCCTGCGGCAATGCAGAAGGTTGCAAATCCTGTCCCAAGGGTGGTTCATCCTGATTGGTTGCATAAGAAGGTTCGGGAGAAGCAGGACAAATTTCGCCAACGAAAATTGGTTGATGTCTTTTATTGTATGAACAGGGATGAACTCTCTAAAAAGCAAAGTAATTCTGGTAGTGTCTGCCATGTTATGGATGGAGAAGCTATTAATGACTTGGAGGATTTTGGTAACAAGACCAGGAATAATATTAGCGGACCTAGACCAATTATGCGGCATTATGAAGCTAATAATGAACAGCACTCGGTGAAGCCTTATGGCATAGAAGATTCTGAGCAAAAATGTAATGATCATGGTAGTGAGCATCAGCTACCAGCACAGTTAGAACCCAATGGATTGTCATCTGAAAATGTTGACAAAACAGCAGATTATCAAGGATGGCTCCAGACGAAGAAGAGAAAGTGGAAAAATATAATAGCTAAAAGAAAGAAGCAAAGATTGGAGAATTCAAAGAAATCAGACTGTGCTGATGGCACTCTTGAAAGACTGAGAAATAAGATAGATCATAAAGCTACAGGAAGAAGTAATGTTGATTCATATTTCAAAAGGCAGGAGGTAGTACTGACGCGTTCCCATTGGCAGATAATACAGCTAATTCACAGTTCACAGATGGGTCAATTTTTTGCTTGGGTTGTTGTCGATGGGGTTATGCTAAAGATTCCAGTTTCACTTCCTAGGGTCTTTTACCTCAATTCTAGGTCACCAATTACTGAGCAGTTTATGGGTAAACGTGTCAATAAGGCTCTTCCACATGGAAGGCATAGCTATAACCTGTATGAGGTTACAATTAATGAAGTTCAATTTAAAGAAACGAGCAGAAAGCTTGCAGCTCTTCTGGCAGATCCTGACATTGAGGGAATATATGAAACAAAAGTGCCACTAGAGTTTAATGCCATAGTCCAGCTTGGCTGTGTATGCAAGGTGGACAAAACTGCTAAAAAGCGTAATCTTCAGGAATCATGGAATCTGAGTGAATTGCACATGAAGACCACTACAGAATGCTCTTATCTTGAACAATCCATATCCTTCTTTTACTTGTATCATAGCATGTCTGAGGGGCGGGCTATATACGTTGGATATTTTCCTGCATCAAAAGCAATATCTGTTGTGGTAGTTAATCCGTACCAAAACAAAGACTTATCTCCGGTATTTCTTGAAAGACAATTCCGTGATGCTTGTGAAGCTTTGTCTACTGAGGCGCCTCCCAAAAATGGTATCAGATTTAAGGTGGACTATGTTTTGCATGTCAAGGATGCTGAAACGATGATGCAAAGATTGATAAATGATCAAAGGAATGAGCATCATGGGCCTATGGTTGCTGTCATTGAATGTCCAAATCCCCAGCTAATGAAATTGGCTATCCGAGCTCTAGATGATTTTCCATGCCTGAACATCCCTTCTAATGCACGTGATAGTCAGTACCAGATTCTTGGATGGCAACAAGTTGCTGCAAAAACTGGAATACATCGCTGCGCTGCTTCAGTCCAGTGGCTCAATGAGAGAATTTCTCTCTCAAGATATGCTCATGTACCGTTAGGGAATTTTGAACTTGACTGGCTCATATTTACAGCAGACGTCTTCTTTTCCAGAGCATTGAGGGATAATCAACAGGTACTTTGGATATCCGATGATGGGCTTCCTGATTTAGGCGGAGTTAATGAAGAAGAGACATGTTTTGCTGATGAGGTCCCCCAACCTGTTCTTACCTACCCTGGAGCTTACAGAAAAGTTACAGTAGAGCTAAAGATTCACCACCTGGCCGTAGATGCTCTTCTGAAAAGCAACCAAGTCAATGAGTTTGAAGGAGGTGCTTTGTTAGGATTTGATCATGAAATAAACTCTGGACCGTTTGCCATAAATGATCAGAATGGCATTGATGAGGCTACCTCATGTGCACGTGCTTTTCGAGTCTTAAAGCAGTTAATCCAACGGTGCGTTGCAGATGCAGTTACATCTGGAAATGTATATGCTGATGCAATACTACAGCATCTATATCGATGGCTATGCAGTCCTCAATCAAAACTTCACGACCCAGCTCTTCACCAATTACTCCACAAGGTCATGCAGAAGGTTTTTGCATTGCTGTTGGCGGAGCTCCGTAAATTGGGTGCATCAATTGTTTTTGCAAACTTTTCAAAAATAATTGTAGACACGGGAAAATATGATCTGTCTGCAGCCAAAGCTTACTGTGATAGCTTGTTACGAACTCTACAATCTAGAGATTTATTTGAGTGGATTGAACTTGAACCACTTCAGTTCTGGAGCTCATTGCTATTCATGGATCAGTATAACTATGGTGGAATTCCAGCAAAATCTGATGAGGCTATAAATGACGAATATCGAGTTGACATTATATCGAGTTGGAACATTGCCGAATACTTACCAAAGAAAATCCAGGACCATTTTGTTTGCATTGTTTCTGAATTCATGTACATTCCCTGGAAGTATATGGCTTCATCACAAAATGGCGACTCCTGCACCCCATCAATCACTGCTGGGCCTGCAGAGAAATTCGAATCACTTGTGACAGAATATATTAAAGGGCAGATCAGCTCTAACTTCACAGACAAACTTCTGGGAATTGTTCGCGATATTATGCATCATATGAAGGAGATAAGACTAGGAAAAGACCAGAATGCATCGTCTGGCAACCCTCAACTTGCAGCTGATTTCCACAAAGGGGATGCAGCCTTGGAATTTATCAAGCATGTCTGTGCCGTCCTGGCCCTGGACCAGAGCGTGCAGCATGATGTTCTGGTCATGAGAAAGAATTTGTTGAGATTTGTTCGTGTCAGGGAGTTCGCACCAGAAGCTGAGTTTCGTGATCTGAGTCATTCGTTCATATTACCCAATGTCATCTGCAGCTATTGCAATGATTGCAGAGACTTGGATTTGTGCCGTGACTCAGCTTTACTGAGTCAGGAGTGGCATTGCGGCGTGCCGCAGTGTGGGCAGCCATACGATCGTGAAGTGATGGAAAATGCACTTCTCCAGATTGTACGGCAGAGAGAACGACTATACCACTTGCAAGATCTGGTGTGTGTTAGATGTCACCAGGTGAAAGCTGCTCATTTAGCTGAGCAGTGTGCTTGCGCAGGGTCATACATGTGCAAGGAAGATAGAGCTGAATTCCGTAAAAAGATGCAAATTTTCTACAACATCGCTGCTCGCCAAAAATTCCAACTCCTTAAAGAATGCACCTCATGGATTCTAGAATTGAGATAG 6621 0.4122 MISDSRRWDRKDSRRAKKQKLIRNTEEELEAKLGFDLFSEGEKRLGWLLNFSSSSWEDEDTHKVHSCVDLYFVTQDGSMFKXKYRFQPYFYVATKDKMEMEVEAYLRRRYERQIADIEIKEKEDLDLKNHLSGLQKSYLKLCFDTVQQLMNVKSDLMHVVERNQAKSDAAEAYESILTGRREQKPQDFLDYIIDLREYDVPYHVRFAIDNDIRCGQWYDVCVSNTGVTLEKRTDLLQRAEVRICAFDIETTKLPLKFPDAEYDLIMMISYMVDGQGYLLINRECVGDNIEDLEYTPKPEFEGCFKVTNVQNEVELLRLWFSHMQEVKPGIYVTYNGDFFDWPFVERRAAHHGFKMRDELGFQCDNSQGECRAKFACHLDCFAWVKRDSYLPQGSQGLKAVTKAKLGYDPLEVNPEDMVRFAKEKPQMMASYSVSDAVATYYLYTTYVHPFIFSLATIIPMSPDEVLRKGSGTLCEMLLMVQAYKANVICPNKHQSDREKFYNNHLLESETYIGGHVECLESGVFRSDLPTSFTLEPSAYEQLINNLDRDLQYAIRVEGKMDLDSISNYDEVKNAIMEKLIKLRDKPICEECPLIYHLDVAAMYPNIILTNRLQPPSIVTDEVCTACDFNRPGKTCLRKLEWVWRGEIFMAKKSDYYHLKKQIESEFVESADRQSSKSFLDLPKPEQQSRLKERLKKYCQKAYKRVLDKPVTELREAGICMRENPFYVDTVRSFRDRRYEYKGLNKVWKGKLSEAKASGNSIKIQEAQDMVVLYDSLQLAHKCILNSFYGYVMRKGARWYSMEMAGVVTYTGAKIIQNARLLVEKIGKPLELDTDGIWCALPGSFPENFTFKTRDTKRKLTISYPCVMLNVDVARNNTNDQYQTLTDPVRKAYTTHSECSIEFEVDGPYKAMILPASKEEGILIKKRYAVFNDDGTLAELKGFEIKRRGELKLIKVFQAELFDKFLHGSTIEECYSAVATVANRWLDLLDNQGRDIADSELLDYISESSTMSKSLADYGEQKSCAVTTARRLADFLGDAMVKDKGLRCQYVVACEPKGTPVSERAVPVAIFETDAEVMKFYVRKWCKVSADVGIRSIVDWSYYRQRLSSAIQKIITIPAAMQKVANPVPRVVHPDWLHKKVREKQDKFRQRKLVDVFYCMNRDELSKKQSNSGSVCHVMDGEAINDLEDFGNKTRNNISGPRPIMRHYEANNEQHSVKPYGIEDSEQKCNDHGSEHQLPAQLEPNGLSSENVDKTADYQGWLQTKKRKWKNIIAKRKKQRLENSKKSDCADGTLERLRNKIDHKATGRSNVDSYFKRQEVVLTRSHWQIIQLIHSSQMGQFFAWVVVDGVMLKIPVSLPRVFYLNSRSPITEQFMGKRVNKALPHGRHSYNLYEVTINEVQFKETSRKLAALLADPDIEGIYETKVPLEFNAIVQLGCVCKVDKTAKKRNLQESWNLSELHMKTTTECSYLEQSISFFYLYHSMSEGRAIYVGYFPASKAISVVVVNPYQNKDLSPVFLERQFRDACEALSTEAPPKNGIRFKVDYVLHVKDAETMMQRLINDQRNEHHGPMVAVIECPNPQLMKLAIRALDDFPCLNIPSNARDSQYQILGWQQVAAKTGIHRCAASVQWLNERISLSRYAHVPLGNFELDWLIFTADVFFSRALRDNQQVLWISDDGLPDLGGVNEEETCFADEVPQPVLTYPGAYRKVTVELKIHHLAVDALLKSNQVNEFEGGALLGFDHEINSGPFAINDQNGIDEATSCARAFRVLKQLIQRCVADAVTSGNVYADAILQHLYRWLCSPQSKLHDPALHQLLHKVMQKVFALLLAELRKLGASIVFANFSKIIVDTGKYDLSAAKAYCDSLLRTLQSRDLFEWIELEPLQFWSSLLFMDQYNYGGIPAKSDEAINDEYRVDIISSWNIAEYLPKKIQDHFVCIVSEFMYIPWKYMASSQNGDSCTPSITAGPAEKFESLVTEYIKGQISSNFTDKLLGIVRDIMHHMKEIRLGKDQNASSGNPQLAADFHKGDAALEFIKHVCAVLALDQSVQHDVLVMRKNLLRFVRVREFAPEAEFRDLSHSFILPNVICSYCNDCRDLDLCRDSALLSQEWHCGVPQCGQPYDREVMENALLQIVRQRERLYHLQDLVCVRCHQVKAAHLAEQCACAGSYMCKEDRAEFRKKMQIFYNIAARQKFQLLKECTSWILELR 2207
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci7g2409 2207 Pfam Domain of unknown function (DUF1744) 1529 1901 IPR013697 GO:0003887|GO:0005634|GO:0006260|GO:0008270
Prci7g2409 2207 Gene3D - 941 1125 IPR042087 -
Prci7g2409 2207 FunFam DNA polymerase epsilon catalytic subunit 240 468 - -
Prci7g2409 2207 SMART polmehr3 239 842 IPR006172 GO:0000166|GO:0003676|GO:0003887
Prci7g2409 2207 PANTHER DNA POLYMERASE EPSILON CATALYTIC SUBUNIT A 16 2205 IPR029703 GO:0003677|GO:0003887|GO:0006260|GO:0006281|GO:0008622
Prci7g2409 2207 Gene3D - 238 468 IPR036397 GO:0003676
Prci7g2409 2207 FunFam DNA polymerase epsilon catalytic subunit 56 227 - -
Prci7g2409 2207 Gene3D Palm domain of DNA polymerase 752 937 IPR023211 -
Prci7g2409 2207 Pfam DNA polymerase family B 756 1065 IPR006134 GO:0000166|GO:0003677
Prci7g2409 2207 CDD DNA_polB_epsilon_exo 240 443 - -
Prci7g2409 2207 Pfam DNA polymerase family B, exonuclease domain 74 400 IPR006133 -
Prci7g2409 2207 CDD POLBc_epsilon 503 1122 - -
Prci7g2409 2207 Gene3D DNA Polymerase, chain B, domain 1 50 232 - -
Prci7g2409 2207 FunFam DNA polymerase epsilon catalytic subunit 941 1125 - -
Prci7g2409 2207 FunFam DNA polymerase epsilon catalytic subunit 756 937 - -
Prci7g2409 2207 MobiDBLite consensus disorder prediction 1222 1249 - -
Prci7g2409 2207 SUPERFAMILY DNA/RNA polymerases 469 1140 IPR043502 -
Prci7g2409 2207 SUPERFAMILY Ribonuclease H-like 56 467 IPR012337 -
Prci7g2409 2207 SMART DUF1744_2 1517 1901 IPR013697 GO:0003887|GO:0005634|GO:0006260|GO:0008270
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci7g2409 1 2097 Core DNA Replication Machinery Family AT1G08260 71.741 0.0 3079
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci7g2409 K02324 - gmx:100812003 3733.34