Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci7g2397 ATGGCGGAAGAACATCGATGCCAAGCTCCAAGCCTGTGCGCTAACAACTGCGGCTTCTTTGGCAGCCCGGCCACGCAAAACCTATGTTCCAAGTGCTATCGAGATTTGCAGCTCAACGAACAACAATCCTCCTCCGCCAAGTTGGTTCTCAACCAATCCCTTGCTCCCCCGTCTTCGACGACCTCGCAGTCGTCTTCTTTGCCGGAACAGATCGCTGGAACTTCGTCCTCTGCGGCATTTGATCCCCCGCGCGCGGTCGATGATGTCAAGAGTGGATCTTCGGCGCGGCCACCGGCTCAGCCGAGCCGATGCGTGACTTGCAGGCGGCGCGTGGGGCTCACGGGATTCAAGTGCAAGTGCGGATCAACATTCTGCGGATCCCACCGGTACCCCGAACAGCACAGATGTGAGTTCGACTTCAAGGGTATGGGTAGGGAGCAGATCGCGAAGGCGAATCCGGTGGTTAAGGCCGAAAAGCTTGAGAAGATCTGA 492 0.5752 MAEEHRCQAPSLCANNCGFFGSPATQNLCSKCYRDLQLNEQQSSSAKLVLNQSLAPPSSTTSQSSSLPEQIAGTSSSAAFDPPRAVDDVKSGSSARPPAQPSRCVTCRRRVGLTGFKCKCGSTFCGSHRYPEQHRCEFDFKGMGREQIAKANPVVKAEKLEKI 163
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci7g2397 163 ProSiteProfiles Zinc finger A20-type profile. 7 41 IPR002653 GO:0003677|GO:0008270
Prci7g2397 163 SMART AN1_Zf_4 104 141 IPR000058 GO:0008270
Prci7g2397 163 Gene3D - 75 159 IPR035896 -
Prci7g2397 163 MobiDBLite consensus disorder prediction 49 102 - -
Prci7g2397 163 ProSiteProfiles Zinc finger AN1-type profile. 98 144 IPR000058 GO:0008270
Prci7g2397 163 Pfam A20-like zinc finger 11 34 IPR002653 GO:0003677|GO:0008270
Prci7g2397 163 Pfam AN1-like Zinc finger 106 140 IPR000058 GO:0008270
Prci7g2397 163 SMART A20_3 10 34 IPR002653 GO:0003677|GO:0008270
Prci7g2397 163 FunFam Zinc finger AN1-type containing 6 80 159 - -
Prci7g2397 163 MobiDBLite consensus disorder prediction 49 77 - -
Prci7g2397 163 SUPERFAMILY Glucocorticoid receptor-like (DNA-binding domain) 12 59 - -
Prci7g2397 163 Gene3D - 1 68 - -
Prci7g2397 163 SUPERFAMILY AN1-like Zinc finger 93 158 IPR035896 -
Prci7g2397 163 PANTHER AN1-TYPE ZINC FINGER PROTEIN 9 163 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci7g2397 Prci-Chr7 36705118 36706493 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci7g2397 1 163 C2H2 Transcription Factor Family AT3G52800 50.877 1.02e-45 145
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci7g2397 - - pcin:129295477 328.176