Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci7g2392 ATGACTTCTTTCTGGGACAGAGCAAGAGAATGGTCTGAAGAGCTTTGCATGGCGACCCACAGAATAGGAGAAACTGGTTTATCTGAGTCAGGACCTTCAACTTCAAGTCACCATGCTCCTTATGGGGTTCTTCACGGGATTAATTCTCCTCCATCCAGCTTAATCAATCAAGGATCTGGTTTTTACTTTGGAGGATTGGAAGAAGCAATTCTGCAAGGAGTGAAGATTAGGAATGAAGAAGCCAAAGCATCTTTATTCACAGGCAAGCCTGCAGCTACACTGGAGATGTTCCCTTCATGGCCCATGAGATTCCAGCACATCCCAAGAGAAAGTGGTTCAAAGTCGGGAGGGGAGAGCACTGATTCAGGATCAGGACTGAATACTATTTCAAGCAAAACAGAAGCACAGTTTGAATCAGAATCTCCCTTGAGTAAAAAAGCATCTTGTACTGATTATCAGGCTCTTGAGCAGCAGCAGAAACAGCAGCTACAGCAACTAGAACAGGAGATGGCAATCGATGCCTCAAGATGCCAAACACAGAATCAGAATCAATCAGCTGCTAGACCGTTGAAGGGAAAGAGGAAGGGAGGCGGTCCTGCATCAGAGAAACAACTTGATCCAAAGACACTTAGGCGTCTAGCTCAGAACAGAGAGGCTGCGAGGAAAAGCCGTCTCAGAAAAAAGGCTTACGTGCAGCAGCTAGAGTCAAGTAGAATAAAGCTTTCCCAGCTCGAGCAAGAGCTTCAAAGAGCACGCTCTGAGGGACTGTTGATGGGCTCTGGTGGTACTGCTAGTGCCAACATAAGTTCTGGTGCTGCAATATTTGACATGGAATATGGAAGATGGTTGGAAGAAGACCAGCGGCACATGGAGGAGCTGCGACGGAGCTTGGAGGTGGCGGTGTCGGACAATGAACTGAGAGTAATGGTGGAGAGTTATTTGAGGCACTACGACGAGATATTTGAACTGAAGGAAGTCGCAGCAAAATCAGACGTGTTTCACGTCATGAACGGAATGTGGACCACCCCGGCCGAGCGATGCTTCCTCTGGATTGCCGGGTTCAGACCCTCCGATCTCATCGGGATGTTGATGCTGCAGTTAGAGCCGGTGGCGGAGCAGCAAAGAATGGGGATGTATGAGCTGAGACAGTCGACGCTGCAAGCGGAGGAGGCTCTGACTCAGGGGCTCGACCAGCTTCAGCACTCTCTCCTTCACACCGTCGTCGGAGGCCTCACTGTCGATGGCGTTCACCAGATGTTTCTCGCTATGACCAAGCTTTCCAACCTCGAAGCCTTTATCCGCCAGGCCGATAATTTGAGACAGCAAACACTTCACCAGTTGTGTCGACTGCTGACAGTTCGTCAAGCAGCAAGATGTTTTCTTGTGATCGGAGAGTACTATGTTCGTCTTCGAGCTCTTAGTTCTCTTTGGGCATCACGACCACGAGAGGCATTGATCAACGATGAGACATGCCAACAAGTAGCAACAAACATGGCAATAGTTCAGTCGTCCCAGAACCATTTCTCGAGTTTCTGA 1536 0.4896 MTSFWDRAREWSEELCMATHRIGETGLSESGPSTSSHHAPYGVLHGINSPPSSLINQGSGFYFGGLEEAILQGVKIRNEEAKASLFTGKPAATLEMFPSWPMRFQHIPRESGSKSGGESTDSGSGLNTISSKTEAQFESESPLSKKASCTDYQALEQQQKQQLQQLEQEMAIDASRCQTQNQNQSAARPLKGKRKGGGPASEKQLDPKTLRRLAQNREAARKSRLRKKAYVQQLESSRIKLSQLEQELQRARSEGLLMGSGGTASANISSGAAIFDMEYGRWLEEDQRHMEELRRSLEVAVSDNELRVMVESYLRHYDEIFELKEVAAKSDVFHVMNGMWTTPAERCFLWIAGFRPSDLIGMLMLQLEPVAEQQRMGMYELRQSTLQAEEALTQGLDQLQHSLLHTVVGGLTVDGVHQMFLAMTKLSNLEAFIRQADNLRQQTLHQLCRLLTVRQAARCFLVIGEYYVRLRALSSLWASRPREALINDETCQQVATNMAIVQSSQNHFSSF 511
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci7g2392 511 Gene3D - 207 257 - -
Prci7g2392 511 Pfam bZIP transcription factor 208 248 IPR004827 GO:0003700|GO:0006355
Prci7g2392 511 CDD bZIP_HBP1b-like 208 260 - -
Prci7g2392 511 MobiDBLite consensus disorder prediction 112 144 - -
Prci7g2392 511 Coils Coil 283 303 - -
Prci7g2392 511 PANTHER TRANSCRIPTION FACTOR TGA9 145 483 - -
Prci7g2392 511 Pfam Seed dormancy control 289 363 IPR025422 GO:0006351|GO:0043565
Prci7g2392 511 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 206 250 IPR004827 GO:0003700|GO:0006355
Prci7g2392 511 MobiDBLite consensus disorder prediction 195 210 - -
Prci7g2392 511 Coils Coil 227 254 - -
Prci7g2392 511 SMART brlzneu 204 269 IPR004827 GO:0003700|GO:0006355
Prci7g2392 511 ProSiteProfiles DOG1 domain profile. 272 480 IPR025422 GO:0006351|GO:0043565
Prci7g2392 511 MobiDBLite consensus disorder prediction 106 144 - -
Prci7g2392 511 SUPERFAMILY Leucine zipper domain 208 250 IPR046347 GO:0003700|GO:0006355
Prci7g2392 511 FunFam BZIP family transcription factor 207 256 - -
Prci7g2392 511 Coils Coil 149 176 - -
Prci7g2392 511 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 211 226 IPR004827 GO:0003700|GO:0006355
Prci7g2392 511 MobiDBLite consensus disorder prediction 176 210 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci7g2392 Prci-Chr7 36610904 36616660 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci7g2392 163 511 bZIP Transcription Factor Family AT1G08320 64.756 1.80e-161 460
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Prci7g2392 DOG1 1.4e-28 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci7g2392 K14431 - gmx:100775461 662.914
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Prci7g2392 7 36610904 36616660 Prci6g0596 6 3982321 3989322 CCT
Prci7g2392 7 36610904 36616660 Prci7g2392 7 36610904 36616660 ECH