Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci7g2387 ATGTATCATAATCACCCGAATCACGCAAAGAACATCCATTCTTCTTCTTCCAGAATGCCAATCCCTTCCGAGAGGCATTTGTTCCTTCAAAGTGGAAATGGGTCTGGAGATTCTGGACTTGTACTTTCAACTGATCCTAAACCCAGGTTGAAATGGACGCCAGATCTCCATGCCCGATTTATTGAAGCAGTCAACCAGCTTGGCGGAGCTGAAAAAGCAACTCCAAAAACAGTAATGAAACTCATGGGGATTCCGGGGCTTACTTTATATCATCTTAAGAGCCATCTTCAGAAGTACAGACTGAGCAAGAATCTTCATGGTCAAAGTAGCAATGTAACACACAAAATCGCACCTAGTGCAAGTGCCGTCAGCGGAGAAAGACTTTCTGAAGCAAATGGAACACACGATCATATGAGCAATCTAACGCTAGGGCCGCAGGCAAACAAAGATTTACATATAAGCGAAGCGTTGCAGATGCAGATTGAGGTGCAGAGAAGGCTAAATGAACAACTTGAGGTACAGAGACACTTGCAGCTCCGAATAGAGGCTCAAGGGAAATACCTGCAGGCTGTGCTTGAAAAGGCTCAGGAGACGCTTGGCAGACAGAATTTAGGAATAGTGGGTCTTGAAGCTGCGAAAGTTCAACTCTCAGAACTGGTGTCCAAAGTATCATCTCGATGTCTGAGTTCTGCTTTCTCAGAGCTGAAGGAATTAAATGCATTTTGCCCCCAGATAAACACGCGAACCAACCAACCCACTGCCTGCTCAATGGACAGCAGCCTCACATCCTGCGAGGGGTCTCAAAGGGAGCAAGAGATGCCAAATGTTGGTATGTGCTTGACGAGACCTTTTAAGGGCCACACCTTCATGGAACCAAAAGACGCCGCTGAGGCGAAAAGGAATAATAATTTTCTTAACCCTTTGGGCAAGAATGTATCAGAAAGAAGTACTGGCAACTTAACAATGAGCATTAGGGTTGAAGGAGAAACAAGGAATGGCAGCAGCATCTATGATGAGAGAATCATAATGGGGAGAGAACCAGATAGTGAGCTCCAGCACCGAAGCACCAATAATAGAACAGAAGGGATGAAATTAGCAGTGGACGAAAAAGTTTCCGGAGATTATAGATTGCCGTACTTTGCTGCGCCAAGACTAGACCTTAACACCCACCAAGAAAACGATGGTGCAGCGAGCAGTAAGCAACTGGACCTGAATGGATTTAGTTGGAACTGA 1233 0.4542 MYHNHPNHAKNIHSSSSRMPIPSERHLFLQSGNGSGDSGLVLSTDPKPRLKWTPDLHARFIEAVNQLGGAEKATPKTVMKLMGIPGLTLYHLKSHLQKYRLSKNLHGQSSNVTHKIAPSASAVSGERLSEANGTHDHMSNLTLGPQANKDLHISEALQMQIEVQRRLNEQLEVQRHLQLRIEAQGKYLQAVLEKAQETLGRQNLGIVGLEAAKVQLSELVSKVSSRCLSSAFSELKELNAFCPQINTRTNQPTACSMDSSLTSCEGSQREQEMPNVGMCLTRPFKGHTFMEPKDAAEAKRNNNFLNPLGKNVSERSTGNLTMSIRVEGETRNGSSIYDERIIMGREPDSELQHRSTNNRTEGMKLAVDEKVSGDYRLPYFAAPRLDLNTHQENDGAASSKQLDLNGFSWN 410
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci7g2387 410 Pfam Myb-like DNA-binding domain 49 100 IPR001005 -
Prci7g2387 410 Gene3D - 46 104 - -
Prci7g2387 410 MobiDBLite consensus disorder prediction 27 46 - -
Prci7g2387 410 SUPERFAMILY Homeodomain-like 46 102 IPR009057 -
Prci7g2387 410 PANTHER MYB FAMILY TRANSCRIPTION FACTOR PHL11 7 303 IPR044848 GO:0003700
Prci7g2387 410 Pfam MYB-CC type transfactor, LHEQLE motif 152 198 IPR025756 -
Prci7g2387 410 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 44 104 IPR017930 -
Prci7g2387 410 FunFam Myb family transcription factor 46 104 - -
Prci7g2387 410 NCBIfam myb-like DNA-binding domain, SHAQKYF class 47 102 IPR006447 GO:0003677
Prci7g2387 410 Coils Coil 154 174 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci7g2387 Prci-Chr7 36590764 36593388 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci7g2387 79 410 G2-like Transcription Factor Family AT3G04030 47.578 2.47e-86 264
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Prci7g2387 Myb_DNA-binding 4.7e-08 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci7g2387 - - gmx:100810396 548.125
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Prci7g2387 7 36590764 36593388 Prci6g0601 6 4019847 4022994 CCT