Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci7g2364 ATGCCACGAGGAAAGGCAAATTCTTCATCAGTTGCTAAGCCTTCTGAACCTGAAAAGCCAACTGAGTCTGATGAGAAGGTTGATCTTGATGAAGAAAATGATCCTGAGGAAACGATGGAAGAAATTGAATATGAAGAAGTAGAAGAAGAGGAAGAGGAGGTGGAAGAGATAGAAGAGGAGGTGGAAGAAGAGGAGGAAGATGAAGAAGTTGAAGAAGAAGAAGAAGATGATGATGATGATGCCGATCATGTTGATGACACTGACACCATGCAAAACATTAGTGGTGATGAGGCAAAGGTGGAAGATGATGATGAGAAGAAAAAGCATGCAGAACTTCTCTCTCTTCCTCCTCATGGGTCTGAAGTTTACATTGGTAGCATTCCTCATGATGCCTCAGGTGAGGATTTGAAGGCTTTTTGTGAGTCTATTGGGGAAGTTATGGAGGTTAGGGTTATGAAAGGAAAAGATTCTGCTGAAAACAAGGGTTTTGGTTTTGTGACCTTCAAAAGTGTGGAATTGGCTTCTAAAGCCATTGAAGAACTGAATAATAAACAATTTATGGGTAAAAAGATAAAATGTTCATCATCTCAAGCAAAACACCGACTTTTCATTGGTAATGTTCCTAGAAGCTGGGGAGATGAGGATCTAAGGAAGGTTGTAGCTGAGATTGGGCCTGGAGTTACAACTGTGGAACTAGTTAAGGATATGAAGCACCCAACAAACAATCGTGGTTTTGCTTTTGTCGACTATTATAATCATGCATGTGCTGAATATTCAAGGAAAAAGATGATGAATCCAAAATTCAAGCTAGGTGACAATGCTCCAACAGTGAGCTGGGCTGACCCTAAAAATTCTGATTCCTCTGCTGCATCTCAGCAGGTGAGGGCAGTATATGTTAAGAACTTACCTAAGGATGTAACTGGAGATCAACTAAAGAAGCTTTTCGAACACCATGGAAAGATTTCAAAGGTGGTTCTGCCGCCAGCAAAGTCTGGGCAGGAAAGGAACAGAATTGGCTTTGTACATTTTGTGGAGAAGTCAAGTGCTATGAAAGCACTTAAAAACACTGAAAGATACGAATTAAATGGTCAAGTTTTGGAGTGCTCTCTAGCAAAGCCACAGGTTGACAAGTCGGGAGGATCAAATACACAGAAGTCAGGATTGCTTCCAGGCTACCCTCCCCATGTTGGTTATAATTTGATTGGAGGTGCCTATGGTGGGCTAGGCGCTGGATATGGTGCAGCAGGTCTTGCACAGGTGGCACATTCGAATCCCTTGCAGCCCATGATACATGGAAGGGGTCCTGCTCCAAGTGGAATGGCCATGATGCCCATGCTTTTGCCAGACGGGCGAATTGGATATGTCCTGCAACAACCAGGAATGCAGCCACAGACCCCACCGTCACATCAGAGAGGCGGCAGGAATGGAGGGAGTGGCAACAGGAACTTCGGCAGTTCAAGCAAGGGAAGGCACAACAATGCTAGTGGCCAAGGGCGCAGATACCGTCCATATTAG 1515 0.4416 MPRGKANSSSVAKPSEPEKPTESDEKVDLDEENDPEETMEEIEYEEVEEEEEEVEEIEEEVEEEEEDEEVEEEEEDDDDDADHVDDTDTMQNISGDEAKVEDDDEKKKHAELLSLPPHGSEVYIGSIPHDASGEDLKAFCESIGEVMEVRVMKGKDSAENKGFGFVTFKSVELASKAIEELNNKQFMGKKIKCSSSQAKHRLFIGNVPRSWGDEDLRKVVAEIGPGVTTVELVKDMKHPTNNRGFAFVDYYNHACAEYSRKKMMNPKFKLGDNAPTVSWADPKNSDSSAASQQVRAVYVKNLPKDVTGDQLKKLFEHHGKISKVVLPPAKSGQERNRIGFVHFVEKSSAMKALKNTERYELNGQVLECSLAKPQVDKSGGSNTQKSGLLPGYPPHVGYNLIGGAYGGLGAGYGAAGLAQVAHSNPLQPMIHGRGPAPSGMAMMPMLLPDGRIGYVLQQPGMQPQTPPSHQRGGRNGGSGNRNFGSSSKGRHNNASGQGRRYRPY 504
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci7g2364 504 Gene3D - 201 281 IPR012677 -
Prci7g2364 504 FunFam RNA recognition motif-containing protein 21 200 - -
Prci7g2364 504 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 200 282 IPR000504 GO:0003723
Prci7g2364 504 CDD RRM_SF 122 194 - -
Prci7g2364 504 MobiDBLite consensus disorder prediction 86 107 - -
Prci7g2364 504 MobiDBLite consensus disorder prediction 456 504 - -
Prci7g2364 504 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 295 373 IPR000504 GO:0003723
Prci7g2364 504 FunFam RNA-binding (RRM/RBD/RNP motifs) family protein 201 281 - -
Prci7g2364 504 Coils Coil 40 78 - -
Prci7g2364 504 Gene3D - 282 392 IPR012677 -
Prci7g2364 504 SMART rrm1_1 296 369 IPR000504 GO:0003723
Prci7g2364 504 SMART rrm1_1 201 278 IPR000504 GO:0003723
Prci7g2364 504 SMART rrm1_1 121 194 IPR000504 GO:0003723
Prci7g2364 504 MobiDBLite consensus disorder prediction 27 85 - -
Prci7g2364 504 Gene3D - 4 200 IPR012677 -
Prci7g2364 504 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 122 192 IPR000504 GO:0003723
Prci7g2364 504 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 202 265 IPR000504 GO:0003723
Prci7g2364 504 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 297 366 IPR000504 GO:0003723
Prci7g2364 504 SUPERFAMILY RNA-binding domain, RBD 117 285 IPR035979 GO:0003676
Prci7g2364 504 MobiDBLite consensus disorder prediction 1 107 - -
Prci7g2364 504 SUPERFAMILY RNA-binding domain, RBD 290 397 IPR035979 GO:0003676
Prci7g2364 504 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 120 198 IPR000504 GO:0003723
Prci7g2364 504 PANTHER HETEROGENEOUS NUCLEAR RIBONUCLEOPROTEIN 7 490 - -
Prci7g2364 504 MobiDBLite consensus disorder prediction 458 494 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci7g2364 Prci-Chr7 36553749 36558961 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci7g2364 126 446 Eukaryotic Initiation Factors Gene Family AT4G34110 26.389 1.17e-12 68.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci7g2364 K13161 - qsa:O6P43_000471 639.417