Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci7g2357 ATGGAAGAAATTGAATATGAAGAAGTAGAAGAAGAGGAAGAGGAGGTGGAAGAGATAGAAGAGGAGGTGGAAGAAGAGGAGGAAGATGAAGAAGTTGAAGAAGAAGAAGAAGATGATGATGATGATGCCGATCATGTTGATGACACTGACACCATGCAAAACATTAGTGGTGATGAGGCAAAGGTGGAAGATGATGATGAGAAGAAAAAGCATGCAGAACTTCTCTCTCTTCCTCCTCATGGGTCTGAAGTTTACATTGGTAGCATTCCTCATGATGCCTCAGGTGAGGATTTGAAGGCTTTTTGTGAGTCTATTGGGGAAGTTATGGAGGTTAGGGTTATGAAAGGAAAAGATTCTGCTGAAAACAAGGGTTTTGGTTTTGTGACCTTCAAAAGTGTGGAATTGGCTTCTAAAGCCATTGAAGAACTGAATAATAAACAATTTATGGGTAAAAAGATAAAATGTTCATCATCTCAAGCAAAACACCGACTTTTCATTGGTAATGTTCCTAGAAGCTGGGGAGATGAGGATCTAAGGAAGGTTGTAGCTGAGATTGGGCCTGGAGTTACAACTGTGGAACTAGTTAAGGATATGAAGCACCCAACAAACAATCGTGGTTTTGCTTTTGTCGACTATTATAATCATGCATGTGCTGAATATTCAAGGAAAAAGATGATGAATCCAAAATTCAAGCTAGGTGACAATGCTCCAACAGTGAGCTGGGCTGACCCTAAAAATTCTGATTCCTCTGCTGCATCTCAGCAGGTGAGGGCAGTATATGTTAAGAACTTACCTAAGGATGTAACTGGAGATCAACTAAAGAAGCTTTTCGAACACCATGGAAAGATTTCAAAGGTGGTTCTGCCGCCAGCAAAGTCTGGGCAGGAAAGGAACAGAATTGGCTTTGTACATTTTGTGGAGAAGTCAAGTGCTATGAAAGCACTTAAAAACACTGAAAGATACGAATTAAATGGTCAAGTTTTGGAGTGCTCTCTAGCAAAGCCACAGGTTGACAAGTCGGGAGGATCAAATACACAGAAGTCAGGATTGCTTCCAGGCTACCCTCCCCATGTTGGTTATAATTTGATTGGAGGTGCCTATGGTGGGCTAGGCGCTGGATATGGTGCAGCAGGTCTTGCACAGGTGGCACATTCGAATCCCTTGCAGCCCATGATACATGGAAGGGGTCCTGCTCCAAGTGGAATGGCCATGATGCCCATGCTTTTGCCAGACGGGCGAATTGGATATGTCCTGCAACAACCAGGAATGCAGCCACAGACCCCACCGTCACATCAGAGAGGCGGCAGGAATGGAGGGAGTGGCAACAGGAACTTCGGCAGTTCAAGCAAGGGAAGGCACAACAATGCTAGTGGCCAAGGGCGCAGATACCGTCCATATTAG 1401 0.4425 MEEIEYEEVEEEEEEVEEIEEEVEEEEEDEEVEEEEEDDDDDADHVDDTDTMQNISGDEAKVEDDDEKKKHAELLSLPPHGSEVYIGSIPHDASGEDLKAFCESIGEVMEVRVMKGKDSAENKGFGFVTFKSVELASKAIEELNNKQFMGKKIKCSSSQAKHRLFIGNVPRSWGDEDLRKVVAEIGPGVTTVELVKDMKHPTNNRGFAFVDYYNHACAEYSRKKMMNPKFKLGDNAPTVSWADPKNSDSSAASQQVRAVYVKNLPKDVTGDQLKKLFEHHGKISKVVLPPAKSGQERNRIGFVHFVEKSSAMKALKNTERYELNGQVLECSLAKPQVDKSGGSNTQKSGLLPGYPPHVGYNLIGGAYGGLGAGYGAAGLAQVAHSNPLQPMIHGRGPAPSGMAMMPMLLPDGRIGYVLQQPGMQPQTPPSHQRGGRNGGSGNRNFGSSSKGRHNNASGQGRRYRPY 466
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci7g2357 466 MobiDBLite consensus disorder prediction 1 69 - -
Prci7g2357 466 MobiDBLite consensus disorder prediction 1 47 - -
Prci7g2357 466 Coils Coil 2 40 - -
Prci7g2357 466 Gene3D - 2 162 IPR012677 -
Prci7g2357 466 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 162 244 IPR000504 GO:0003723
Prci7g2357 466 SMART rrm1_1 163 240 IPR000504 GO:0003723
Prci7g2357 466 SMART rrm1_1 83 156 IPR000504 GO:0003723
Prci7g2357 466 SMART rrm1_1 258 331 IPR000504 GO:0003723
Prci7g2357 466 FunFam RNA-binding (RRM/RBD/RNP motifs) family protein 163 243 - -
Prci7g2357 466 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 257 335 IPR000504 GO:0003723
Prci7g2357 466 MobiDBLite consensus disorder prediction 420 456 - -
Prci7g2357 466 Gene3D - 244 354 IPR012677 -
Prci7g2357 466 SUPERFAMILY RNA-binding domain, RBD 79 335 IPR035979 GO:0003676
Prci7g2357 466 PANTHER HETEROGENEOUS NUCLEAR RIBONUCLEOPROTEIN 7 452 - -
Prci7g2357 466 CDD RRM_SF 84 156 - -
Prci7g2357 466 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 259 328 IPR000504 GO:0003723
Prci7g2357 466 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 164 227 IPR000504 GO:0003723
Prci7g2357 466 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 84 154 IPR000504 GO:0003723
Prci7g2357 466 MobiDBLite consensus disorder prediction 418 466 - -
Prci7g2357 466 MobiDBLite consensus disorder prediction 48 69 - -
Prci7g2357 466 SUPERFAMILY RNA-binding domain, RBD 163 248 IPR035979 GO:0003676
Prci7g2357 466 Gene3D - 163 243 IPR012677 -
Prci7g2357 466 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 82 160 IPR000504 GO:0003723
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci7g2357 Prci-Chr7 36553716 36558961 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci7g2357 88 408 Eukaryotic Initiation Factors Gene Family AT4G34110 26.944 6.31e-13 68.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci7g2357 K13161 - qsa:O6P43_000471 619.772