Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci7g2350 ATGCCCCCACACACACAAGCATCAATGGAAGATCTCCCTCCTGGTTTTCGCTTCTACCCAACAGAGGAAGAGCTAGTAGCTTTCTACCTCCATAACAGGCTTCAAGGTCGATTCGACCGCATCAACAGAGTCATCCCTGACATTGGCATTTATGATTTTGAGCCCTCCCAACTTCCCAAGCTCGCGGGAGAGATGTGTCGTGGAGACACAGAGCAATGGTTCTTCTTCTCACCGAGACAAGAGAGGGAAGCCAGAGGAGGAAGGCCCAACAGAACCACGGCCAGCGGGTATTGGAAAGCCACGGGTTCTCCGGGGTACGTTTACTCCTCTGATAATAAAGTCATAGGGTTGAAGAAAACCATGGTTTATTACAGAGGGAAAGCTCCTTCCGGGAGGAAAACCAAGTGGAAGATGAACGAATACAGGGCTATTGAATCCTCTCACCAATCCTCCGTCGCGGCCCCTAAGTTGAGGCACGAATTCAGCTTGTGCCGAGTTTACGTGATATCGGGAAGCTTTCGAGCGTTTGATCGGCGCCCTTTAGCAGTTTCAGCGAGTGCGCATGATCAGAACACACAGATGGAGGATCACCCCAAAGTCCCAGACGATGGAGGATCGAGCGGTGCAAACCGGAATGTAAATAATGAGGAAGAAGTAGCTCTACTGGAATGGCTACATTTTTCTCGTGATGCTTATGTTAGTCATGACTCAAATCCTTGA 720 0.4972 MPPHTQASMEDLPPGFRFYPTEEELVAFYLHNRLQGRFDRINRVIPDIGIYDFEPSQLPKLAGEMCRGDTEQWFFFSPRQEREARGGRPNRTTASGYWKATGSPGYVYSSDNKVIGLKKTMVYYRGKAPSGRKTKWKMNEYRAIESSHQSSVAAPKLRHEFSLCRVYVISGSFRAFDRRPLAVSASAHDQNTQMEDHPKVPDDGGSSGANRNVNNEEEVALLEWLHFSRDAYVSHDSNP 239
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci7g2350 239 MobiDBLite consensus disorder prediction 184 212 - -
Prci7g2350 239 ProSiteProfiles NAC domain profile. 12 169 IPR003441 GO:0003677|GO:0006355
Prci7g2350 239 PANTHER PROTEIN CUP-SHAPED COTYLEDON 2-RELATED 11 187 - -
Prci7g2350 239 SUPERFAMILY NAC domain 7 167 IPR036093 GO:0003677|GO:0006355
Prci7g2350 239 Pfam No apical meristem (NAM) protein 13 142 IPR003441 GO:0003677|GO:0006355
Prci7g2350 239 Gene3D NAC domain 21 172 IPR036093 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci7g2350 Prci-Chr7 36513809 36515187 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci7g2350 10 183 NAC Transcription Factor Family AT5G22380 68.000 9.54e-86 253
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Prci7g2350 NAM 8.9e-30 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci7g2350 - - gmx:100780264 307.375