Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci7g2338 ATGCAAGGACAGGAGAGAATGACCGATGTGGTTTCCAGGGAATCGCACATGTCGATCGCTGCTTCGTCCATGTTTCCTGGATTCAGGTTCTGTCCTACCGACGAAGAGTTGATCTCCTATTATCTCAGGAAGAAGCTGGGCGGACACGAAGAGAGCGTTCAAGTGATTTCTGAGGTTGAGATTTGCAGATATGAGCCTTGGGATTTACCAGCCAAATCATTCATTCAATCAGAAAACGAGTGGTTCTTCTTCTCCCCTCGTGGAAGAAAGTACCCGAATGGTTCACAGAGTAAGAGGGCAACTGAATGTGGCTATTGGAAGGCCACTGGAAAAGAGCGCAACGTAAAGTCAGGTTCTAATGTTATCGGCACCAAGCGAACTTTGGTATTCCATATGGGTCGTGCCCCAAAAGGAGAAAGGACTGAATGGATCATGCACGAGTACTGCGTCGATGACAAATCTCAGGATTCTTTAGTTGTTTGTCGGCTAAAGAGGAACACACAGTTTCGCCAGAACGATGCTTCAAACAGAGCATCTTCAAGTCAAGAACGGGCAGTGAATTCTCATGAAAGCAACTGTGCTATCTCCGAAGCTGAGATAGATCAAAGGGGTGTGTCCGAACAAGATAAAGGGGTCGGATGCAGTTCAAAGCGCAGCAGTTGCAGTTACGATTCTCCTTCAGTGGAGCAAATTGATTCTGCCTCTGAATCCAATCAAAGGACAGCCAATTATGACGCTGCTGTGACAGAATCTTCGAGTCACCAAAAGGAGGTGGATGAAGAGGATTGTTATGCTGAGATACTGAAGAATGATATCATCAAATTAGATGAATCTTCACTGACGTCGCAAGAGGCTCACACAAGATCGCAGGATCCTCCTCAGACATTTCCATTCCAAGGCACAGCGCAACGAAGAATTAGATTAAAGGTGGATAAATCATCAACGCGTTCTGCTGCTGCAGGACTTGGTTTTCCAAGCTCAAAACGCCCCTCCAAGACTACCACCCTCTTGGGCACATTAACAAAACGAACGGTTTTATGTGTTTTCTTCGTTTTAACTTTGATAGCCCTATATTTGTGCTTACTGGGTCTGGACAGTATCGTTTTAACAAATCGGTCTGGGGAGTATCAGACCAGTGAAAACCTGTGA 1149 0.4569 MQGQERMTDVVSRESHMSIAASSMFPGFRFCPTDEELISYYLRKKLGGHEESVQVISEVEICRYEPWDLPAKSFIQSENEWFFFSPRGRKYPNGSQSKRATECGYWKATGKERNVKSGSNVIGTKRTLVFHMGRAPKGERTEWIMHEYCVDDKSQDSLVVCRLKRNTQFRQNDASNRASSSQERAVNSHESNCAISEAEIDQRGVSEQDKGVGCSSKRSSCSYDSPSVEQIDSASESNQRTANYDAAVTESSSHQKEVDEEDCYAEILKNDIIKLDESSLTSQEAHTRSQDPPQTFPFQGTAQRRIRLKVDKSSTRSAAAGLGFPSSKRPSKTTTLLGTLTKRTVLCVFFVLTLIALYLCLLGLDSIVLTNRSGEYQTSENL 382
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci7g2338 382 MobiDBLite consensus disorder prediction 280 300 - -
Prci7g2338 382 ProSiteProfiles NAC domain profile. 24 166 IPR003441 GO:0003677|GO:0006355
Prci7g2338 382 MobiDBLite consensus disorder prediction 171 195 - -
Prci7g2338 382 MobiDBLite consensus disorder prediction 212 251 - -
Prci7g2338 382 MobiDBLite consensus disorder prediction 171 260 - -
Prci7g2338 382 Pfam No apical meristem (NAM) protein 26 149 IPR003441 GO:0003677|GO:0006355
Prci7g2338 382 PANTHER PROTEIN CUP-SHAPED COTYLEDON 2-RELATED 23 248 - -
Prci7g2338 382 Gene3D NAC domain 33 171 IPR036093 GO:0003677|GO:0006355
Prci7g2338 382 SUPERFAMILY NAC domain 12 165 IPR036093 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci7g2338 Prci-Chr7 36440958 36443527 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci7g2338 11 285 NAC Transcription Factor Family AT2G27300 52.536 1.10e-95 287
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Prci7g2338 NAM 5.9e-35 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci7g2338 - - cam:101495489 498.819