Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci7g2335 ATGACTGCCAATTCGAACCGACCCGCCTTAATGACTTCCATTGTGAATTACTGCCACTGGGAATCGCAGGTTCGTGTCCAGGACCAGGACGCTGGGAGCTGGGCAGCACTTGAATATTATTTTATCTTTATTATTTTTAATTTTGTTTATTTATTTATTTTTATCAAGCGCTTTCGGCTTCCCTCCACATCTATATCCGAACCAAATTCCCTCCTTCGTTCTGTCCCTGGTTTTTTCCCTCGTCTTCTGCCCCCCCCCCTCTCTCTTTTTCATTTTTCTTACTTCCCCCAAGGCACCCAGATCTCATCCTCTATCTTCCTTATCCAATTTGCCTTCCCCGATTTTGCTCTTCTCTCCTTCACCCCATGCACATCAACTCTTAATCCTCTAACCCCCTCCTCGATCCCCTCCATCCTTTTCCAACTCGATCTCTGCCCTGCATTTCTATCTCGCCTCTGGATGTCGGGTTCTCAACCTCCTTCCACCTCGTCTCAGCAGCCCCAGCAGACTGTGACCTCCGTGAAACGCCAATTCCCATTTTCGTCCCTGAGACCTCCCTTTGTAGCTCCCGCTGATTATCATCGCTTCACGCCCCACCATCGTCCACCGGCTGCCCAGCAAGTTGACCCCATCATTGTTCGCTCCCCTCAATTAAAGCAGAGGAGTGACACAGCTGATTATGAAGCTGATTCTCATGGTCGGGTGACCTCTGGATCTGCTGAAGTTGCTAACAATCCTTTTCAGACACCTACATCAGGAAAGACAGGGAAGGCAAGAAAAGCCTCAAAGCCTCAAACTCCAGGTTCGATTATCGGCTCTCCTTCAGGCAACAATCTCACTCCTGCTGGTCCTTGTCGTTACGACAGCTCATTATGTCTATTGACAAAGAAGTTCATCAATTTAATCAAGCAAGCAGAGGATGGTATTCTTGATCTTAATAAAGCTGCTGACACATTAGAGGTGCAAAAAAGGAGGATATACGATATAACAAATGTTCTTGAAGGGATTGGTCTTATTGAAAAGAAGCTCAAGAACAGAATTCAATGGAAGGGACTGGATGTTACGAGACCAGGAGAGGCTGATGATAATTTTGGTAGTTTACAGGCAGAGATTGAAAATCTTACGTCGGAGGAGTGCCAATTAGATGGACAAATAAGGGAGACGCAGGAAAGACTAATGGAACTTAGTGAAGATGAGAATAATCAAAAGTGGCTTTTTGTCACTGAGGAGGATATAAAGGGCTTGCCTTGTTTCCAGAATGAAACCTTGATAGCCATTAAAGCTCCGCATGGCACTACTTTGGAGGTCCCAGATCCTGATGAGGCTGCTGATTATCCCCAGAGGAGATACAGGATAGTCTTGAGAAGCACAATGGGCCGGATAGATGTTTACCTTGTTAGTCAATTTGAAGAGAAGTTTGAAGAGATTAACGGGGTTGATGTGGCACCCAATCTTCCATCCAGTCCTGAGATCAACAAGCATCCAGCAACGGAAGCCAGAGAGGATGTGGGGAAGGACCTAGGGATGCAGGGACAATATGATCATGGAACTTTTTCAGATTATAGTGCCTCACAGGACTTTGCGGGTGGGATCATGAAGATCGTTCCTTCAGATATTGATATAAATGCTGATTACTGGCTTTTATCAGATGCCGATGTTAGCATAACAGACATGTGGAGAACAGAACCTGGAGTTGAATGGAGTGAACTTGATGCGCTGAATGAAGATTGTTGCATGAATCATGGGAGCTCACCACGACCCCAGACTCCTCCTTCAAACACAAGTGAAGCGCCGCCTTCTGCTAACCCCAAGGGAGGTTGA 1821 0.4613 MTANSNRPALMTSIVNYCHWESQVRVQDQDAGSWAALEYYFIFIIFNFVYLFIFIKRFRLPSTSISEPNSLLRSVPGFFPRLLPPPLSLFHFSYFPQGTQISSSIFLIQFAFPDFALLSFTPCTSTLNPLTPSSIPSILFQLDLCPAFLSRLWMSGSQPPSTSSQQPQQTVTSVKRQFPFSSLRPPFVAPADYHRFTPHHRPPAAQQVDPIIVRSPQLKQRSDTADYEADSHGRVTSGSAEVANNPFQTPTSGKTGKARKASKPQTPGSIIGSPSGNNLTPAGPCRYDSSLCLLTKKFINLIKQAEDGILDLNKAADTLEVQKRRIYDITNVLEGIGLIEKKLKNRIQWKGLDVTRPGEADDNFGSLQAEIENLTSEECQLDGQIRETQERLMELSEDENNQKWLFVTEEDIKGLPCFQNETLIAIKAPHGTTLEVPDPDEAADYPQRRYRIVLRSTMGRIDVYLVSQFEEKFEEINGVDVAPNLPSSPEINKHPATEAREDVGKDLGMQGQYDHGTFSDYSASQDFAGGIMKIVPSDIDINADYWLLSDADVSITDMWRTEPGVEWSELDALNEDCCMNHGSSPRPQTPPSNTSEAPPSANPKGG 606
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci7g2335 606 Coils Coil 302 322 - -
Prci7g2335 606 CDD E2F_DD 362 468 IPR032198 GO:0046983
Prci7g2335 606 Pfam E2F transcription factor CC-MB domain 367 467 IPR032198 GO:0046983
Prci7g2335 606 MobiDBLite consensus disorder prediction 266 280 - -
Prci7g2335 606 PANTHER TRANSCRIPTION FACTOR E2F 236 563 IPR015633 GO:0000978|GO:0006357
Prci7g2335 606 FunFam E2F transcription factor 1 280 353 - -
Prci7g2335 606 MobiDBLite consensus disorder prediction 578 606 - -
Prci7g2335 606 MobiDBLite consensus disorder prediction 156 175 - -
Prci7g2335 606 Gene3D - 359 468 - -
Prci7g2335 606 MobiDBLite consensus disorder prediction 237 259 - -
Prci7g2335 606 SUPERFAMILY "Winged helix" DNA-binding domain 286 349 IPR036390 -
Prci7g2335 606 SMART E2F_TDP_2 286 351 IPR003316 GO:0005667|GO:0006355
Prci7g2335 606 MobiDBLite consensus disorder prediction 218 280 - -
Prci7g2335 606 Gene3D - 280 353 IPR036388 -
Prci7g2335 606 SUPERFAMILY E2F-DP heterodimerization region 364 468 IPR037241 -
Prci7g2335 606 Pfam E2F/DP family winged-helix DNA-binding domain 288 351 IPR003316 GO:0005667|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci7g2335 Prci-Chr7 36428290 36432921 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci7g2335 163 596 E2F-DP Transcription Factor Family AT5G22220 53.533 1.15e-144 425
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF E2F-DP Prci7g2335 E2F_CC-MB 4.6e-33 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci7g2335 K06620 - gmx:100819817 636.336