Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci7g2308 ATGGGCCTTTTGTTGAAAGAAGTTCTCAAGAGTCTCTGCAGTCGGAATCGATGGTCTTACGCTGTCTTCTGGAAGATCGGCCGCCATAATCCCAAGCTGTTAATTTGGGAAGATTGCTATTATGAACCCTTGCCATATCAATTTCCTAGGCGCATCGCCCGAACAGAGACTTCTAATTTGCCTTTTGGGAGTGGGGAAGGCTTCTGGCGTTCCTCTGATGCTCCTTCTTATATTGGAACCCAAGAAGAGGACAGCGTCTGCGCTTTGATCAACAAAATGATGGCGAACAATTCGGTCAATGTCATGGGTGAAGGGATCATTGGACGGGCTGCATTTACAGGAAACCATCAGTGGATTCATTTGAACAATTTTAGAAGAGAAACCTATCCATTGGAGGTGTGCAATGAGGTGCATCTCCAGTTTCTAGCTGGAATGAAGACCGTAGCAGTTATTCCTGTGCTTCCCTATGGGGTTGTTCAGCTTGGTTCTTTCTTGCCAATAACAGAGAACATGGGATTAGTGAATGAAGTGAAGAGCTTTACTATGCAATTTGGGTTTGTCACTGATGCTCTTTCATCTGAAGACTTTTCGGCAAAAGCTTCTATTGAAAAATTTGGTAATCCTGTTACTGTTGGGGTGCCAGTGTCTGTTGATCAACCAGTAATTACCTCCTGTCCCACACCCTCAGAAACTTATGTCTCCAACCAAGAAATCAATTTGTCTCATACTTCAAGGCCTATTGTTCAACCAGCTCATCCTCGTAGGGGAGAGATAAATAACCACCAGTGTTCTGTATTGACACATCAAACCCCTAACATTACTCATGCATTATCCAATTACCATGGTAATCTTTGTGAAACTTCAGCAATGCCAATGATGAATCCAAGTTTTGATTTTCAGCCTGAGAATTTAGTTGTGGAGGCAGAGGGGATGCCTTTGAATCTTGACTCATGTCTGCAACAACATACTGCCTCATTGGATGCTAGGTCTGCACTTATTCACAGTCACAGCACTGTTAGTTCTTCATCAATTCATTGTGGAACGAGCAGACTTTTGAGGCCAAATCTCATTGCCAGCTCTGCTTCTAATCCTTCTAAAGTTGCCACAGCTGATTTTTGTGAAATCAGGAAAGCTGGGACTGGGCTTCAAAATGATGGTTTAACTAATGGAGGGGGCTACCCTCTACCTAACTTGACCAGTCAATTTGGTACTTGTCCCTGGTCTCTAGAAGATTCTGATCAGAAGAATATTCCTGAAGATTTAAAGCATGTTCATGATAAATCAGCTCTAACGGGCCAAAGGATGGATGATGATCAGCTGTATGGCATTAAGATCCCATCTTTTCATCTTGAGGAGCAGCAGGTGTCTATGAAACATCACTTCTCTCCTTGTCTTCCACCTCCATCAAGTGATGACCTATTTGATGTTTTAGGCGTGGATCTTAAAAACAAACTTCTGAATGAAAACTGGAATAAGTTGCTTGCCAAAGAATCAAATGCTGGTACTGAAATTCTGGATAACAAGGCAGCACGTTTGAGTGTGCTAGATGTGGATCCTGATGTTTGTTCAATCAAAGAGGCCATTTCAAACAGCGGTGTCTTCTCTGAGAGGGGAAATGACCATCTCCTGGATGCTGTGGTCTCAAGAGCGAAGTCTCTTGGGAACCAGGATTCTGATGATATGTCTTGCTGGACAACATTGACGGGGACTAGTGCCGCAGAAGCTAGTTCTCTTAGGTCTGGATGTAGCAGGGATGATGTTCGAAACTGTTCTCAAGCTAATTCCATTTATGGATCTCAACTGAGCTCATGGGTTGAGGATGCTACAAATGTAAAGCGTGAAAATAGTGTCTCAACTGGATACTCTAAGCAGCCTGATGAAGTTTGTAAATCAAATCGTAAAAGACTTAAGCCTGGGGAGAACCCTAGACCTCGTCCTAAAGATCGCCAAATGATTCAAGATCGTGTGAAAGAGCTACGGGAAATTGTGCCAAATGGAACCAAATGTAGCATAGATGCACTTCTTGAACGTACTATCAAGCACATGCTTTTCTTGCAAAGTGTGACAAAGCATGCTGACAAGCTAAAACAAACACGGGAATCTAAGATTATGAGTAAGGAAGGTGGACTGCTTTTAGAAGATAATTTTGAGGGAGGTGCTACATGGGCATATGTGATTGGCTCACAATCAATGGTTTGCCCCATCATAGTTGAGGATCTGAATCCCCCTCGTCAGATGCTAGTGGAGATGCTTTGTGAAGAACGAGGTTTCTTTCTGGAAATAGCTGACTTAATCAGAGGATTGGGGTTGACCATCTTGAAGGGGGTGATGGAAGCCCGAAATGACAAGGTCTGGGCATGCTTTGCTGTAGAGGCAAATCGGGACGTAACAAGGATGGAGATATTTATGTCACTGGTTCATCTTTTGGAGCAGACGGGGAAGGGCAGTGCATCTATATCAAACCCTATGTATCACTCCTTCCCTCAAGCCGCCAGATAG 2499 0.4354 MGLLLKEVLKSLCSRNRWSYAVFWKIGRHNPKLLIWEDCYYEPLPYQFPRRIARTETSNLPFGSGEGFWRSSDAPSYIGTQEEDSVCALINKMMANNSVNVMGEGIIGRAAFTGNHQWIHLNNFRRETYPLEVCNEVHLQFLAGMKTVAVIPVLPYGVVQLGSFLPITENMGLVNEVKSFTMQFGFVTDALSSEDFSAKASIEKFGNPVTVGVPVSVDQPVITSCPTPSETYVSNQEINLSHTSRPIVQPAHPRRGEINNHQCSVLTHQTPNITHALSNYHGNLCETSAMPMMNPSFDFQPENLVVEAEGMPLNLDSCLQQHTASLDARSALIHSHSTVSSSSIHCGTSRLLRPNLIASSASNPSKVATADFCEIRKAGTGLQNDGLTNGGGYPLPNLTSQFGTCPWSLEDSDQKNIPEDLKHVHDKSALTGQRMDDDQLYGIKIPSFHLEEQQVSMKHHFSPCLPPPSSDDLFDVLGVDLKNKLLNENWNKLLAKESNAGTEILDNKAARLSVLDVDPDVCSIKEAISNSGVFSERGNDHLLDAVVSRAKSLGNQDSDDMSCWTTLTGTSAAEASSLRSGCSRDDVRNCSQANSIYGSQLSSWVEDATNVKRENSVSTGYSKQPDEVCKSNRKRLKPGENPRPRPKDRQMIQDRVKELREIVPNGTKCSIDALLERTIKHMLFLQSVTKHADKLKQTRESKIMSKEGGLLLEDNFEGGATWAYVIGSQSMVCPIIVEDLNPPRQMLVEMLCEERGFFLEIADLIRGLGLTILKGVMEARNDKVWACFAVEANRDVTRMEIFMSLVHLLEQTGKGSASISNPMYHSFPQAAR 832
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci7g2308 832 CDD bHLH_AtLHW_like 640 709 - -
Prci7g2308 832 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 636 685 IPR011598 GO:0046983
Prci7g2308 832 MobiDBLite consensus disorder prediction 627 650 - -
Prci7g2308 832 Pfam bHLH-MYC and R2R3-MYB transcription factors N-terminal 5 179 IPR025610 -
Prci7g2308 832 PANTHER TRANSCRIPTION FACTOR BHLH155-LIKE ISOFORM X1-RELATED 1 819 IPR043561 GO:0003700|GO:0006355
Prci7g2308 832 MobiDBLite consensus disorder prediction 614 650 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci7g2308 Prci-Chr7 36351437 36358028 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci7g2308 470 828 Basic Helix-Loop-Helix Transcription Factor Gene Family AT2G27230 55.348 2.61e-114 360
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci7g2308 - - pcin:129315676 1635.93
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Prci7g2308 7 36351437 36358028 Prci6g0666 6 4377764 4384400 CCT
Prci7g2308 7 36351437 36358028 Prci7g2308 7 36351437 36358028 ECH