Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci7g2307 ATGCGTCACGGGATATATTTTGCGGTTTTATTGAGAAAAATATTGCTGTTAATTTGGGAAGATTGCTATTATGAACCCTTGCCATATCAATTTCCTAGGCGCATCGCCCGAACAGAGACTTCTAATTTGCCTTTTGGGAGTGGGGAAGGCTTCTGGCGTTCCTCTGATGCTCCTTCTTATATTGGAACCCAAGAAGAGGACAGCGTCTGCGCTTTGATCAACAAAATGATGGCGAACAATTCGGTCAATGTCATGGGTGAAGGGATCATTGGACGGGCTGCATTTACAGGAAACCATCAGTGGATTCATTTGAACAATTTTAGAAGAGAAACCTATCCATTGGAGGTGTGCAATGAGGTGCATCTCCAGTTTCTAGCTGGAATGAAGACCGTAGCAGTTATTCCTGTGCTTCCCTATGGGGTTGTTCAGCTTGGTTCTTTCTTGCCAATAACAGAGAACATGGGATTAGTGAATGAAGTGAAGAGCTTTACTATGCAATTTGGGTTTGTCACTGATGCTCTTTCATCTGAAGACTTTTCGGCAAAAGCTTCTATTGAAAAATTTGGTAATCCTGTTACTGTTGGGGTGCCAGTGTCTGTTGATCAACCAGTAATTACCTCCTGTCCCACACCCTCAGAAACTTATGTCTCCAACCAAGAAATCAATTTGTCTCATACTTCAAGGCCTATTGTTCAACCAGCTCATCCTCGTAGGGGAGAGATAAATAACCACCAGTGTTCTGTATTGACACATCAAACCCCTAACATTACTCATGCATTATCCAATTACCATGGTAATCTTTGTGAAACTTCAGCAATGCCAATGATGAATCCAAGTTTTGATTTTCAGCCTGAGAATTTAGTTGTGGAGGCAGAGGGGATGCCTTTGAATCTTGACTCATGTCTGCAACAACATACTGCCTCATTGGATGCTAGGTCTGCACTTATTCACAGTCACAGCACTGTTAGTTCTTCATCAATTCATTGTGGAACGAGCAGACTTTTGAGGCCAAATCTCATTGCCAGCTCTGCTTCTAATCCTTCTAAAGTTGCCACAGCTGATTTTTGTGAAATCAGGAAAGCTGGGACTGGGCTTCAAAATGATGGTTTAACTAATGGAGGGGGCTACCCTCTACCTAACTTGACCAGTCAATTTGGTACTTGTCCCTGGTCTCTAGAAGATTCTGATCAGAAGAATATTCCTGAAGATTTAAAGCATGTTCATGATAAATCAGCTCTAACGGGCCAAAGGATGGATGATGATCAGCTGTATGGCATTAAGATCCCATCTTTTCATCTTGAGGAGCAGCAGGTGTCTATGAAACATCACTTCTCTCCTTGTCTTCCACCTCCATCAAGTGATGACCTATTTGATGTTTTAGGCGTGGATCTTAAAAACAAACTTCTGAATGAAAACTGGAATAAGTTGCTTGCCAAAGAATCAAATGCTGGTACTGAAATTCTGGATAACAAGGCAGCACGTTTGAGTGTGCTAGATGTGGATCCTGATGTTTGTTCAATCAAAGAGGCCATTTCAAACAGCGGTGTCTTCTCTGAGAGGGGAAATGACCATCTCCTGGATGCTGTGGTCTCAAGAGCGAAGTCTCTTGGGAACCAGGATTCTGATGATATGTCTTGCTGGACAACATTGACGGGGACTAGTAATGCTTCTGTACCCTCTCCTGCCTATTGTAAGGTTATATCTGATCATACTAGGGGTGAATTCTTTGGTTTTCCTAAAGATTTGGGTAAAGCAGGTGCCGCAGAAGCTAGTTCTCTTAGGTCTGGATGTAGCAGGGATGATGTTCGAAACTGTTCTCAAGCTAATTCCATTTATGGATCTCAACTGAGCTCATGGGTTGAGGATGCTACAAATGTAAAGCGTGAAAATAGTGTCTCAACTGGATACTCTAAGCAGCCTGATGAAGTTTGTAAATCAAATCGTAAAAGACTTAAGCCTGGGGAGAACCCTAGACCTCGTCCTAAAGATCGCCAAATGATTCAAGATCGTGTGAAAGAGCTACGGGAAATTGTGCCAAATGGAACCAAATGTAGCATAGATGCACTTCTTGAACGTACTATCAAGCACATGCTTTTCTTGCAAAGTGTGACAAAGCATGCTGACAAGCTAAAACAAACACGGGAATCTAAGATTATGAGTAAGGAAGGTGGACTGCTTTTAGAAGATAATTTTGAGGGAGGTGCTACATGGGCATATGTGATTGGCTCACAATCAATGGTTTGCCCCATCATAGTTGAGGATCTGAATCCCCCTCGTCAGATGCTAGTGGAGATGCTTTGTGAAGAACGAGGTTTCTTTCTGGAAATAGCTGACTTAATCAGAGGATTGGGGTTGACCATCTTGAAGGGGGTGATGGAAGCCCGAAATGACAAGGTCTGGGCATGCTTTGCTGTAGAGGCAAATCGGGACGTAACAAGGATGGAGATATTTATGTCACTGGTTCATCTTTTGGAGCAGACGGGGAAGGGCAGTGCATCTATATCAAACCCTATGTATCACTCCTTCCCTCAAGCCGCCAGATAG 2544 0.43 MRHGIYFAVLLRKILLLIWEDCYYEPLPYQFPRRIARTETSNLPFGSGEGFWRSSDAPSYIGTQEEDSVCALINKMMANNSVNVMGEGIIGRAAFTGNHQWIHLNNFRRETYPLEVCNEVHLQFLAGMKTVAVIPVLPYGVVQLGSFLPITENMGLVNEVKSFTMQFGFVTDALSSEDFSAKASIEKFGNPVTVGVPVSVDQPVITSCPTPSETYVSNQEINLSHTSRPIVQPAHPRRGEINNHQCSVLTHQTPNITHALSNYHGNLCETSAMPMMNPSFDFQPENLVVEAEGMPLNLDSCLQQHTASLDARSALIHSHSTVSSSSIHCGTSRLLRPNLIASSASNPSKVATADFCEIRKAGTGLQNDGLTNGGGYPLPNLTSQFGTCPWSLEDSDQKNIPEDLKHVHDKSALTGQRMDDDQLYGIKIPSFHLEEQQVSMKHHFSPCLPPPSSDDLFDVLGVDLKNKLLNENWNKLLAKESNAGTEILDNKAARLSVLDVDPDVCSIKEAISNSGVFSERGNDHLLDAVVSRAKSLGNQDSDDMSCWTTLTGTSNASVPSPAYCKVISDHTRGEFFGFPKDLGKAGAAEASSLRSGCSRDDVRNCSQANSIYGSQLSSWVEDATNVKRENSVSTGYSKQPDEVCKSNRKRLKPGENPRPRPKDRQMIQDRVKELREIVPNGTKCSIDALLERTIKHMLFLQSVTKHADKLKQTRESKIMSKEGGLLLEDNFEGGATWAYVIGSQSMVCPIIVEDLNPPRQMLVEMLCEERGFFLEIADLIRGLGLTILKGVMEARNDKVWACFAVEANRDVTRMEIFMSLVHLLEQTGKGSASISNPMYHSFPQAAR 847
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci7g2307 847 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 651 700 IPR011598 GO:0046983
Prci7g2307 847 PANTHER TRANSCRIPTION FACTOR BHLH155-LIKE ISOFORM X1-RELATED 15 834 IPR043561 GO:0003700|GO:0006355
Prci7g2307 847 MobiDBLite consensus disorder prediction 642 665 - -
Prci7g2307 847 Pfam bHLH-MYC and R2R3-MYB transcription factors N-terminal 15 162 IPR025610 -
Prci7g2307 847 MobiDBLite consensus disorder prediction 629 665 - -
Prci7g2307 847 CDD bHLH_AtLHW_like 655 724 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci7g2307 Prci-Chr7 36351437 36358028 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci7g2307 453 843 Basic Helix-Loop-Helix Transcription Factor Gene Family AT2G27230 53.250 2.06e-116 366
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci7g2307 - - pcin:129315676 1652.11