Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci7g2306 ATGGGGACGTTCTTTCATGGAGGCAGTTCAGAAATCCAACCCTCTGGTGCTCCTGCCGCCGCCGGAGACGGCTTCCACACCCTTTACCTTCTCAACCCCGCCACCGCCGGCCCCTACGTTCCCTACTCCGGTTCGAACCCCCATCCTCAATCGACGGCCGGCGTGCTTCTTCTCAATCCCGGCTCTCCCCCAAACGCCCTCAACCTCGCCGCCCTCCCCAACGCGCCGCCTCCTTCATCCTCCGACCACGATCCCTCCCGACCTTCCTTTCTTGGACACGAAATCTCCTCCTTCCACGGCTTCACCGCCCCGGCTGCTCCTCCTCGGGTCCACTACAACCTCTGGGGCTCCATGATTGATCCCCACCCGACATCAGCCGTGGCAACAGCGTCTAGCAGTTCCGGTGGGGTTCAGTCCGCCTCCGCCGCCCTAGACGCGTCGCCCCATTTGAGTTTCAGGAGGCCTTCTCAGCAGGGTCTGTCCCTCAGCCTTTCGTCTCAACAAACAGCTTATAGGTCGCTTTCCGGCGAGCTTGACGTTCCCGGACACCCTCATCATGCTGCTGCCATATCGACCTCGAACTGTGATGATGTGCGGATTCTGGTTCCGAGTAATCATGTTTCTTCAAATGGAATTTCTAGCGTGCAGAGTTTTGTTTTGGGATCCAAGTATTTGAAAGCAGCTCAGGAGGTTTTGGATGAGGTTGTCAATGTGGGTAAGGGAATCAACCAAGAGGTGGCTGTGAAAGAGAAGACGGAACCAAATAAACAATCAACATCTGGTGGGCATCGTGACGGTTCAAGTGGTGGTGATGGAGGAGGAGGAGAAAATAGTGAAAATGGGAAGCAAGGAAGTGAGCTCGGTGCGGCACAGAGACAAGAACTTCAGATGAAGAAGTCCAAGCTTGTCGCCATACTTGATGAGGTGGAACAGAGGTACAGACAGTATCACCACCAAATGCAGATAGTGATAGCGTCATTCGAGCAGGCAGCGGGATATGGTGCAGCAAAAACATACACGTCCCTTGCCTTAAAGACCATCTCAAAGCAGTTTCGATGTCTCAGAGACGCAATCGCTTCACAAATAAGAGCAACAAGCAAGACCTTGGGTGAGGATGATTGCTTGGGAGCTAAGGTAGAAGGTTCGAGGCTGAGGTTCGTGGACCACCATCTTCGGCAGCAACGGGCTTTGCAGCAGCTGGGAATGATCCAGCACAACGCTTGGAGACCCCAACGAGGCTTACCTGAACGAGCTGTCTCCATTCTTCGTGCTTGGCTCTTCGAGCATTTTCTTCACCCCTACCCCAAGGACTCCGATAAAGTTATGCTCGCAAAACAAACTGGACTTACTCGTAGCCAGGTGTCAAACTGGTTCATAAATGCAAGAGTTCGGCTATGGAAACCAATGGTGGAAGAAATGTACGTGGAAGAAATGAAAGATCAGCAAGAAGGGAATAAGGAGGTGGGGTCAAGCCGTAAGGATTCACAGCCACAAGAATCAGGTGGGTTTCGGCTTGAACATCAGATGAGACGCTTCCAATCAAATCCAGATCAAAGCTTCAATAAACAAATAACTACCCAAACCAACACCTCAAATTCCTCAATCTACCTTCAACCACATTCTTCAGGATTCCCAGTAGCTGCAGGGTCGTCGTCTCATCATCATGACAAGATGCAAATAAGAAGCCCCAAAAAGCCAAGAAGTTCAGAAGTGATGAACAACTCTCCAAGCAGTATCCTGTCGGTGGACATGGAAATGAAGCCTGGAGACACAGACAGATCAGAAGGCACCGCAAAGTTTGGCATGGAAAGGCACCCGTTGATAAGTAATGGGAATGGAGGAGGATATGGAGGGTTCACCATGGAAGACATGGGAAGGTACAGTGTGGCTGACCACCTGGCTCCGAGGTTCCACGGAAATGGAGTGTCTCTCACTCTTGGACTTCCTCACAGTACTGACAATCTTCCCCACCATGGATTTCTGTCGCACAATATGAATTTGACAGCTGAAGGAACCGACTTCTGTGCAATCAATGCTCCACAACCTCATTCCAACACCAATTATGACAATATGGATCCCATTCAGAGCAGAAAGAGGTTTGCTGCCCAGTTATTGCCAGATTTTGTGGCCTGA 2133 0.5124 MGTFFHGGSSEIQPSGAPAAAGDGFHTLYLLNPATAGPYVPYSGSNPHPQSTAGVLLLNPGSPPNALNLAALPNAPPPSSSDHDPSRPSFLGHEISSFHGFTAPAAPPRVHYNLWGSMIDPHPTSAVATASSSSGGVQSASAALDASPHLSFRRPSQQGLSLSLSSQQTAYRSLSGELDVPGHPHHAAAISTSNCDDVRILVPSNHVSSNGISSVQSFVLGSKYLKAAQEVLDEVVNVGKGINQEVAVKEKTEPNKQSTSGGHRDGSSGGDGGGGENSENGKQGSELGAAQRQELQMKKSKLVAILDEVEQRYRQYHHQMQIVIASFEQAAGYGAAKTYTSLALKTISKQFRCLRDAIASQIRATSKTLGEDDCLGAKVEGSRLRFVDHHLRQQRALQQLGMIQHNAWRPQRGLPERAVSILRAWLFEHFLHPYPKDSDKVMLAKQTGLTRSQVSNWFINARVRLWKPMVEEMYVEEMKDQQEGNKEVGSSRKDSQPQESGGFRLEHQMRRFQSNPDQSFNKQITTQTNTSNSSIYLQPHSSGFPVAAGSSSHHHDKMQIRSPKKPRSSEVMNNSPSSILSVDMEMKPGDTDRSEGTAKFGMERHPLISNGNGGGYGGFTMEDMGRYSVADHLAPRFHGNGVSLTLGLPHSTDNLPHHGFLSHNMNLTAEGTDFCAINAPQPHSNTNYDNMDPIQSRKRFAAQLLPDFVA 710
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci7g2306 710 MobiDBLite consensus disorder prediction 247 286 - -
Prci7g2306 710 MobiDBLite consensus disorder prediction 528 574 - -
Prci7g2306 710 MobiDBLite consensus disorder prediction 478 501 - -
Prci7g2306 710 MobiDBLite consensus disorder prediction 67 92 - -
Prci7g2306 710 PANTHER HOMEOBOX PROTEIN TRANSCRIPTION FACTORS 133 491 - -
Prci7g2306 710 ProSiteProfiles 'Homeobox' domain profile. 405 468 IPR001356 GO:0003677
Prci7g2306 710 SUPERFAMILY Homeodomain-like 409 475 IPR009057 -
Prci7g2306 710 FunFam BEL1-like homeodomain protein 9 411 473 - -
Prci7g2306 710 MobiDBLite consensus disorder prediction 478 493 - -
Prci7g2306 710 Coils Coil 292 312 - -
Prci7g2306 710 MobiDBLite consensus disorder prediction 528 548 - -
Prci7g2306 710 Gene3D - 411 489 - -
Prci7g2306 710 Pfam Associated with HOX 219 359 IPR006563 -
Prci7g2306 710 SMART prehox3 213 360 IPR006563 -
Prci7g2306 710 SMART HOX_1 408 472 IPR001356 GO:0003677
Prci7g2306 710 Pfam Homeobox KN domain 425 464 IPR008422 GO:0003677|GO:0006355
Prci7g2306 710 CDD homeodomain 408 469 IPR001356 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci7g2306 Prci-Chr7 36314077 36317948 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci7g2306 1 710 Homeobox Transcription Factor Family AT2G35940 41.131 3.26e-131 402
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-BELL Prci7g2306 POX 1.1e-48 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci7g2306 - - gmx:100779075 659.062
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Prci7g2306 7 36314077 36317948 Prci6g0668 6 4422948 4427528 CCT
Prci7g2306 7 36314077 36317948 Prci7g2306 7 36314077 36317948 ECH