Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci7g2305 ATGGCCGATATTGACGTTCCTCAATATTTCTTGTGTCCTATTTCTCTGGAGATCATGAAAGATCCTGTGACGACCGTAACAGGTATAACCTACGACAGAGAGAGCATCGAGCAGTGGTTGCTCATGGCGAAGGAGAGGAATTGCCCGGTCACCAAGCAGCCGTTGCCCACCGACTCGCCCTTGACCCCCAACCATACCTTACTCAGGCTAATCCAGGCTTGGTCCTCACAAAAGGCTCGCAACGGCGCAGTTCGGATTCCAGCCCCGAAACCCCTCCTCTCCTCCATCCACGTTCACAAACTTATCTCTCATCTTCAGATTCCTCATCTGTGTCAAACGACACTGAGAAAAATGGATGCTTTGGCAGGCAGCGAAAGCAACAGAAGGTGCATGGTGGAATCTGGAGCACTCGAAGCTTTGGTCTCCATAATTACCCAGAAATTCAAGGAAGGTATAACAAGTTGCCTTGAACAAGCTTTGAGAGTTCTTCGTTTACTCTGGGCTGCATCGTCCATCGCTCACGTGAAGCCTCTGGTTTGTGAAAACTTGGACTTTATCACCTCTTTGGCCTGGGCATTGCAAATTGGCGTGAGAAACAACGTTAATATAGTAAACGAAACAATGCCTATTTTGAAATCGACCGCAGGAGCCGCAGATTCAACCCTTCTGGGAAACTTAAATGTTGAATTTTTCAGAGAAATAACGAAGGTACTAAAAAACAGAAGAGTCTCGGAGCAGGCTATCAAATCAGCCTTGCAGGTGCTCATAGAAACGTGCCCCTTAGGAAGAAACCGAATGAAAATCGTAGAATCAGGAGCGGTCTTTGTATTAATTGATCTTGAGCTAGAAAAACCGACAAAGAACATAACGGAGCTCGTGTTCAACCTTCTGGCAAATCTATGTTCGTGTGCTGATGGTAGAGAACAGTTTCTGCGGCACGCAGCGGGAATCGCTGTGATGTCTAAGAGGATTCTGAGGGTTTCGAATGCAACTGACGATAGAGCTGTTCAAATATTTTCGTTGATAGCTAAGTACTCGTCATCGAATGATGTCGTTTTGGAGATGTTGAGGGTGGGAGCTGTGTCCAAGCTTTGCATGGTGATGCAAGCTGACTGTGCTTCGTATTTGAAGGAGAAAGCAAGAAGCATCCTTAGGTTACACTCCAAAACTTGGAACAATTCTCCCTGCATTCAAGTATATTTGCTGACCAGGCACCAAAGGTGA 1224 0.4632 MADIDVPQYFLCPISLEIMKDPVTTVTGITYDRESIEQWLLMAKERNCPVTKQPLPTDSPLTPNHTLLRLIQAWSSQKARNGAVRIPAPKPLLSSIHVHKLISHLQIPHLCQTTLRKMDALAGSESNRRCMVESGALEALVSIITQKFKEGITSCLEQALRVLRLLWAASSIAHVKPLVCENLDFITSLAWALQIGVRNNVNIVNETMPILKSTAGAADSTLLGNLNVEFFREITKVLKNRRVSEQAIKSALQVLIETCPLGRNRMKIVESGAVFVLIDLELEKPTKNITELVFNLLANLCSCADGREQFLRHAAGIAVMSKRILRVSNATDDRAVQIFSLIAKYSSSNDVVLEMLRVGAVSKLCMVMQADCASYLKEKARSILRLHSKTWNNSPCIQVYLLTRHQR 407
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci7g2305 407 PANTHER WDSAM1 PROTEIN 3 398 IPR045185 GO:0061630
Prci7g2305 407 ProSiteProfiles U-box domain profile. 5 81 IPR003613 GO:0004842|GO:0016567
Prci7g2305 407 SMART Ubox_2 9 74 IPR003613 GO:0004842|GO:0016567
Prci7g2305 407 SUPERFAMILY RING/U-box 4 78 - -
Prci7g2305 407 Pfam U-box domain 6 78 IPR003613 GO:0004842|GO:0016567
Prci7g2305 407 Gene3D - 79 397 IPR011989 -
Prci7g2305 407 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 4 78 IPR013083 -
Prci7g2305 407 SUPERFAMILY ARM repeat 107 381 IPR016024 -
Prci7g2305 407 CDD RING-Ubox_PUB 7 58 IPR045210 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci7g2305 Prci-Chr7 36309218 36311125 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci7g2305 3 397 U-box Gene Family AT2G35930 39.055 2.72e-94 287
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci7g2305 - - gmx:100787419 534.258