Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci7g2292 ATGTCAATGGATATGATGGCAACCGAACGTGTTTGTTATGTTCACTGCAACTTCTGCAACACCATCCTAGCGGTAAGTGTTCCATGCAGCAGTTTCTTTAACATAGTGACGGTTCGATGTGGGCACTGTGCTAATTTACTGTCAGTTAACATGGGAGCATCTCTCCAAACATTCCCTCCTCAAGAACTTCAGTTACAGAAACAAGAATCATGCAACAGAGAGGTGGGATCATCTTCAAAAAGCAGTAAATTTTCTGCATTTGAGTCTGCAGAGCATGAACAACATAGGATTCCTCCCATTCGTCCCCCTGAGAAGAGACAACGAGTTCCTTCTGCTTATAACAGGTTCATCAAGGAGGAAATCCAGAGGATTAAGGCTAGTAACCCCGATGTCAGCCACAGGGAGGCGTTTAGCACCGCGGCCAAAAACTGGGCACATTTTCCCCATATTCACATTGGATTAAAGCTGGATGGCAACAAGCAAGCAAAGTTGGACCAGGAAGAGGGAACTCAAAAATCTAATGGCCTATATTGA 534 0.4457 MSMDMMATERVCYVHCNFCNTILAVSVPCSSFFNIVTVRCGHCANLLSVNMGASLQTFPPQELQLQKQESCNREVGSSSKSSKFSAFESAEHEQHRIPPIRPPEKRQRVPSAYNRFIKEEIQRIKASNPDVSHREAFSTAAKNWAHFPHIHIGLKLDGNKQAKLDQEEGTQKSNGLY 177
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci7g2292 177 MobiDBLite consensus disorder prediction 70 109 - -
Prci7g2292 177 SUPERFAMILY HMG-box 98 147 IPR036910 -
Prci7g2292 177 PANTHER PROTEIN YABBY 6-RELATED 1 164 IPR006780 GO:0007275
Prci7g2292 177 MobiDBLite consensus disorder prediction 86 103 - -
Prci7g2292 177 CDD HMG-box_SF 108 144 - -
Prci7g2292 177 FunFam axial regulator YABBY 5-like 92 150 - -
Prci7g2292 177 Pfam YABBY protein 7 154 IPR006780 GO:0007275
Prci7g2292 177 MobiDBLite consensus disorder prediction 70 85 - -
Prci7g2292 177 Gene3D High mobility group box domain 89 172 IPR036910 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci7g2292 Prci-Chr7 36183683 36190070 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci7g2292 1 177 C2C2-YABBY Transcription Factor Family AT1G08465 65.054 1.73e-80 235
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-YABBY Prci7g2292 YABBY 1.6e-70 CL0114
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci7g2292 K25796 - gmx:100785458 293.123