Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci7g2291 ATGTCAATGGATATGATGGCAACCGAACGTGTTTGTTATGTTCACTGCAACTTCTGCAACACCATCCTAGCGGTAAGTGTTCCATGCAGCAGTTTCTTTAACATAGTGACGGTTCGATGTGGGCACTGTGCTAATTTACTGTCAGTTAACATGGGAGCATCTCTCCAAACATTCCCTCCTCAAGAACTTCAGAAACAAGAATCATGCAACAGAGAGGTGGGATCATCTTCAAAAAGCAGTAAATTTTCTGCATTTGAGTCTGCAGAGCATGAACAACATAGGATTCCTCCCATTCGTCCCCCTGAGAAGAGACAACGAGTTCCTTCTGCTTATAACAGGTTCATCAAGGAGGAAATCCAGAGGATTAAGGCTAGTAACCCCGATGTCAGCCACAGGGAGGCGTTTAGCACCGCGGCCAAAAACTGGGCACATTTTCCCCATATTCACATTGGATTAAAGCTGGATGGCAACAAGCAAGCAAAGTTGGACCAGGAAGAGGGAACTCAAAAATCTAATGGCCTATATTGA 528 0.447 MSMDMMATERVCYVHCNFCNTILAVSVPCSSFFNIVTVRCGHCANLLSVNMGASLQTFPPQELQKQESCNREVGSSSKSSKFSAFESAEHEQHRIPPIRPPEKRQRVPSAYNRFIKEEIQRIKASNPDVSHREAFSTAAKNWAHFPHIHIGLKLDGNKQAKLDQEEGTQKSNGLY 175
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci7g2291 175 PANTHER PROTEIN YABBY 6-RELATED 1 162 IPR006780 GO:0007275
Prci7g2291 175 MobiDBLite consensus disorder prediction 68 107 - -
Prci7g2291 175 SUPERFAMILY HMG-box 96 145 IPR036910 -
Prci7g2291 175 MobiDBLite consensus disorder prediction 84 101 - -
Prci7g2291 175 FunFam axial regulator YABBY 5-like 90 148 - -
Prci7g2291 175 CDD HMG-box_SF 106 142 - -
Prci7g2291 175 MobiDBLite consensus disorder prediction 68 83 - -
Prci7g2291 175 Gene3D High mobility group box domain 87 170 IPR036910 -
Prci7g2291 175 Pfam YABBY protein 7 152 IPR006780 GO:0007275
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci7g2291 Prci-Chr7 36183666 36190070 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci7g2291 1 175 C2C2-YABBY Transcription Factor Family AT1G08465 64.865 6.00e-79 231
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-YABBY Prci7g2291 YABBY 4.1e-67 CL0114
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci7g2291 K25796 - cave:132163901 291.967