Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci7g2282 ATGAACTGGAGTAGAGGCAGCATCCTAGGCCATGGCTCATCGGCCACCGTCTCCCTGGCTTCCTCCCAGTATGGCGAAGCCTTCTTCGCTGTCAAGTCGTCGGAGCTTTCTTGCTCGGAATTGTTACAGAGAGAGCAGAGAATTCTCTCTTCCTTGTCTTCTCCTTATATAGTTAGCTATAAAGGGTGTGACATCACGAAGGAGAACAGCAAGGTCTTCTACAATCTTTTCATGGAGTATATGCCTCTTGGAACGCTTCTTCAAGACTCGCCGCAGGGTGGCCGCCTCGACGAGCCAATGATCGCCCGCTACATCCGGCAAGTTGCGCAGGGGCTAGAGTATCTGCATTCAAAAGGGTTGGTACATTGTGACATTAAGGGTACCAATATCTTAATTGGCGAAGGTGGAGCCAAAATTGCAGACTTTGGATGTGCTAAGCGGTGGGAGACGGCAGCGCCCATGAGTGGGACGCCGATGTTTATGGCGCCGGAGGTGGCGCGAGGCGAAGAACAGGGGTGTCCTTCTGACATTTGGGCACTTGGGTGCACCGTCATTGAAGTGGTTTCTGGGCTTTCCCCATGGCCTAACGTAGGAGACCCCGTTTCAGTTCTTTACCGGATAGCATATTCCGGTGAGGTGCCGGAGATTCCGGGTTTTCTATCAGAGGAAGCAAAGGATTTCTTGGGAAAGTGCTTAAGGAGGAATCCGAAAGAGAGATGGACGGCAAGTCAACTACTGAAGCATCCATTTCTGGAGGAATTGAATTCCAATTCTAAGCAAATCCACGAATCTAATTCAAGTTCTCCAACAAGTATTCTGGAACAAGGCTTTTGGAGTTGTGTGGAAGAATCAGATAGTGTGGGCAATCTAGTCCATAGTCACACAAGTTTCGAAAATTCGCCAGCTGGTAGAATCAGACGGTTAGCTGTGGGTTCAGGGGAACCCAATTGGATAGAAGATGAGAATTGGATCGCTACGATGGGGAATGAAGGAGGAGTCGAAGCATCGACCAGCAATAATTTGGAAGAGTCAGAGAAAAGCAATATTAGTAGTAGCATTAGCGATTGTTTTTGGGATGATTACGAATGTAGGGATGTGAGTATTATAACAAGTAGTATCATTTTTGAGAGAGGCATTGATAAAGTGCCGATCCATCCAGTGTCAATTTTTTTATAA 1176 0.4745 MNWSRGSILGHGSSATVSLASSXQYGEAFFAVKSSELSCSELLQREQRILSSLSSPYIVSYKGCDITKENSKVFYNLFMEYMPLGTLLQAXSPQGGRLDEPMIARYIRQVAQGLEYLHSKGLVHCDIKGTNILIGEGGAKIADFGCAKRWETAAPMSGTPMFMAPEVARGEEQGCPSDIWALGCTVIEVVSGLSPWPNVGDPVSVLYRIAYSGEVPEIPGFLSEEAKDFLGKCLRRNPKERWTASQLLKHPFLEELNSNSKQIHESNSSSPTSILEQGFWSCVEESDSVGNLVHSHTSFENSPAGRIRRLAVGSGEPNWIEDENWIATMGNEGGVEASTSNNLEESEKSNISSSISDCFWDDYECRDVSIITSSIIFERGIDKVPIHPVSIFL 393
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci7g2282 393 SMART serkin_6 3 253 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci7g2282 393 FunFam Mitogen-activated protein kinase kinase kinase 17 2 306 - -
Prci7g2282 393 PANTHER CCR4-NOT TRANSCRIPTIONAL COMPLEX SUBUNIT CAF120-RELATED 3 287 - -
Prci7g2282 393 ProSiteProfiles Protein kinase domain profile. 3 253 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci7g2282 393 Pfam Protein kinase domain 5 253 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci7g2282 393 CDD STKc_MAPKKK 2 253 - -
Prci7g2282 393 ProSitePatterns Serine/Threonine protein kinases active-site signature. 122 134 IPR008271 GO:0004672|GO:0006468
Prci7g2282 393 Gene3D Transferase(Phosphotransferase) domain 1 2 300 - -
Prci7g2282 393 SUPERFAMILY Protein kinase-like (PK-like) 3 289 IPR011009 -
Prci7g2282 393 ProSitePatterns Protein kinases ATP-binding region signature. 9 33 IPR017441 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci7g2282 Prci-Chr7 36078146 36079490 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci7g2282 2 348 MAP Kinase Kinase Kinase AT5G55090 50.135 9.53e-114 340
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK STE_STE11 Prci7g2282 Pkinase 1.1e-51 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci7g2282 K20716 - qsa:O6P43_028662 487.263
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Prci7g2282 7 36078146 36079490 Prci6g0722 6 4788182 4789503 CCT
Prci7g2282 7 36078146 36079490 Prci7g2282 7 36078146 36079490 ECH