Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci7g2267 ATGAAACACTTTATAGCTGTGCCTGGAATAATTTGGATTTGGATAATCCTTTGCGGTCTTGCTCGTTGCCAAAAGCCAGCATCTGTGAATATTGGTGCGGTTTTCACATTTGATTCGGTTATAGGTAGAGCTGCGAAGGTGGCGATGCACATGGCTGTCGATGACGTCAATGCAGACCCCATAGTTCTTAATGGGACGAAACTGAACTTGGTAATGGAGGACACCAATTGCAACGTCTTCTTGGGATCGATTGGAGCGTTTCGTATACTTGAACAAGGGGTTGCAGCCATAATTGGTCCACAATCATCTTCCATCTCTCACGTGATTTCTCAAATCGCTAACGGTCTCCAAGTGCCTCAAGTTTCATATGCTGCCACTGATCCTACCTTGTCGGCCCTCCAATTTCCTTTCTTTTTTCGTTCTGTACCAAGCGACTCTGTGCAAATGACAGCACTGGCTGAATTAATTGATTTCTTTGGATGGAGAGAGGTCATTGCCGTCTTCTTGGATGATGATTATGGGAGAAATGGAATATCTGCTCTGGGTGATGAACTTGAAAAACGGAGAATAAGGATTGCTCATAAGTTGCCTATTAGCATAAAGTTTGATATGAATGAAATCACTAACTTGCTCAATCATTCCAAAGTGTTTGGTCCTCGTGTGTATGTTGTTCACGTCAACCTAGATCCTAGATTAAGAGTTTTTAACATAGCCCACAAACTTAAAATGATGTCTAGTGATTTTGTTTGGCTTGCCACGGATTGGCTCTCTGCTACTCTAGATTCATTCTCCCCACAGAATCAGACCTCTCTCAGTGTTGTGCAAGGGGTGGTTGGACTACGTCCACACATTCCAGATTCTTTCCAGAAAAGATATTTTGTTTCTCAGTGGAAAAACATGCAGAATGAAAGCGCAGCAGCTATTGGGTTAAACCATTATGGATTTTATGCATATGATTCAATTTGGGCTGTTGCGCATTCAATTGATAAGTTTATTGAAATACATAAGAATATTACATTCTCTGTCAGTAATAACTCAAGGCTATTGAATACAGAAACCACTGACATACGGCTTGAAAAACTCAAAGTCTTCACAGGTGGATCTGATCTGATCAACATATTGTTGCAATCAAATTATACTGGTGTGAGTGGTCACCTTCAATTTAGTCCAGATAGGAATATTGTTAGTGGGGGCTATGAAGTTATCAATATCAATCAGATGGAAATTACCACGGTTGGATATTGGTCTAATGATTTAGGATTTTCAGTGGTTCCTCCTGAAACTCTTAAGAAGAAAGGATATGGTAGGGTTCCCCAAGATCAGAAGCTTAACATTATTACTTGGCCAGGTGGAATGACCGGAAGACCACGTGGATGGGTGATTGCTGATAATGCAAGACCACTGAGAATTGGAGTTCCCAGGAGAGCAAGTTTTGTTGAGTTCGTCACTGAGCTGCCTGGTAGTCATCAAATTCAAGGGTACTGCATTGATATTTTCAAGAAAGCACTGGAGTTTGTACCATATGAAGTCCCCTATGTATTTAAGCCTTTTGGGAACGGTCAATCAAACCCCAATTATGGTGCGCTTGTGCAGACGGTTGCTGACAATGTATTTGATGCGGTTGTCGGAGACATAGCAATTGTGACAAACCGTACAAGGATTGTGGATTTTTCTCAGCCTTTCACATCAACTGGTCTTGTTATAGTGGCTCCAATCAAGAATGCAAAATCAAGTGCTTGGGTATTTCTGAAACCATTTACAGCGGACATGTGGTGCGTCACTGCAGCTTCATTTGTAATGATTGGAGTAGTTATATGGATTCTTGAACACCGAATCAATGATGATTTCCGTGGTCCTCCTAAGAGGCAACTTGTGACGATGTGTATGTTCAGCCTCTCAACCCTGTTTAAGACAAATCAGGAAAATACAGTAAGCTCACTTAGTCGAATGGTGATGATAGTATGGCTTTTTCTGTTGATGGTGATCACGGCTAGCTATACAGCAAGCTTGACTTCAATTCTTACAGTGGAGCAGCTTTCATCACCCATCACTGGCATTGATAGCTTGATTGCAAGTAACTGGCCTATAGGGTACCAAGTAGGTTCGTATGCTTTCAACTATCTGACAGAGAGTCTTTATGTACAAAGATCAAGACTTGTTCCTCTAGGTAACCCTGAAGAATATGCAAGAGCTCTGCAGCTAGGGCCTTCTCGCGGAGGGGTGGCAGCTATAATTGACGAGCTTCCATACATAGAGTTGTTTCTGTCAACACAAACTGATTTTGGTATTATTGGGCAACCATTTACCAAAAGCAGTTGGGGATTTGTAAGTAGCCTTCTGATCAGAATATTACAGAAGTGA 2361 0.4163 MKHFIAVPGIIWIWIILCGLARCQKPASVNIGAVFTFDSVIGRAAKVAMHMAVDDVNADPIVLNGTKLNLVMEDTNCNVFLGSIGAFRILEQGVAAIIGPQSSSISHVISQIANGLQVPQVSYAATDPTLSALQFPFFFRSVPSDSVQMTALAELIDFFGWREVIAVFLDDDYGRNGISALGDELEKRRIRIAHKLPISIKFDMNEITNLLNHSKVFGPRVYVVHVNLDPRLRVFNIAHKLKMMSSDFVWLATDWLSATLDSFSPQNQTSLSVVQGVVGLRPHIPDSFQKRYFVSQWKNMQNESAAAIGLNHYGFYAYDSIWAVAHSIDKFIEIHKNITFSVSNNSRLLNTETTDIRLEKLKVFTGGSDLINILLQSNYTGVSGHLQFSPDRNIVSGGYEVININQMEITTVGYWSNDLGFSVVPPETLKKKGYGRVPQDQKLNIITWPGGMTGRPRGWVIADNARPLRIGVPRRASFVEFVTELPGSHQIQGYCIDIFKKALEFVPYEVPYVFKPFGNGQSNPNYGALVQTVADNVFDAVVGDIAIVTNRTRIVDFSQPFTSTGLVIVAPIKNAKSSAWVFLKPFTADMWCVTAASFVMIGVVIWILEHRINDDFRGPPKRQLVTMCMFSLSTLFKTNQENTVSSLSRMVMIVWLFLLMVITASYTASLTSILTVEQLSSPITGIDSLIASNWPIGYQVGSYAFNYLTESLYVQRSRLVPLGNPEEYARALQLGPSRGGVAAIIDELPYIELFLSTQTDFGIIGQPFTKSSWGFVSSLLIRILQK 786
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci7g2267 786 Gene3D - 47 396 - -
Prci7g2267 786 PRINTS Metabotropic gamma-aminobutyric acid type B receptor signature 317 329 - -
Prci7g2267 786 PRINTS Metabotropic gamma-aminobutyric acid type B receptor signature 102 130 - -
Prci7g2267 786 PRINTS Metabotropic gamma-aminobutyric acid type B receptor signature 42 58 - -
Prci7g2267 786 FunFam Glutamate receptor 144 311 - -
Prci7g2267 786 Gene3D - 144 420 - -
Prci7g2267 786 SUPERFAMILY Periplasmic binding protein-like I 23 460 IPR028082 -
Prci7g2267 786 PIRSF IGluLR_plant 1 779 IPR017103 -
Prci7g2267 786 FunFam Glutamate receptor 579 717 - -
Prci7g2267 786 PRINTS Metabotropic glutamate GPCR signature 148 164 IPR000337 GO:0004930|GO:0007186|GO:0016020
Prci7g2267 786 PRINTS Metabotropic glutamate GPCR signature 164 181 IPR000337 GO:0004930|GO:0007186|GO:0016020
Prci7g2267 786 PRINTS Metabotropic glutamate GPCR signature 42 57 IPR000337 GO:0004930|GO:0007186|GO:0016020
Prci7g2267 786 Pfam Ligand-gated ion channel 588 692 IPR001320 GO:0015276|GO:0016020
Prci7g2267 786 PANTHER IONOTROPIC GLUTAMATE RECEPTOR 29 779 IPR015683 -
Prci7g2267 786 SMART GluR_14 469 786 IPR001320 GO:0015276|GO:0016020
Prci7g2267 786 SUPERFAMILY Periplasmic binding protein-like II 445 776 - -
Prci7g2267 786 CDD PBP1_GABAb_receptor_plant 30 425 IPR044440 -
Prci7g2267 786 Gene3D - 579 717 - -
Prci7g2267 786 Pfam Receptor family ligand binding region 46 405 IPR001828 -
Prci7g2267 786 FunFam Glutamate receptor 463 579 - -
Prci7g2267 786 Pfam Ligated ion channel L-glutamate- and glycine-binding site 483 570 IPR019594 GO:0004970|GO:0016020
Prci7g2267 786 Gene3D - 460 578 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci7g2267 Prci-Chr7 35927297 35932309 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci7g2267 13 775 Ion Channels AT2G32400 58.039 0.0 909
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci7g2267 K05387 - gmx:100796389 1178.31