Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci7g2266 ATGAAACACTTTATAGCTGTGCCTGGAATAATTTGGATTTGGATAATCCTTTGCGGTCTTGCTCGTTGCCAAAAGCCAGCATCTGTGAATATTGGTGCGGTTTTCACATTTGATTCGGTTATAGGTAGAGCTGCGAAGGTGGCGATGCACATGGCTGTCGATGACGTCAATGCAGACCCCATAGTTCTTAATGGGACGAAACTGAACTTGGTAATGGAGGACACCAATTGCAACGTCTTCTTGGGATCGATTGGAGCGTTTCGTATACTTGAACAAGGGGTTGCAGCCATAATTGGTCCACAATCATCTTCCATCTCTCACGTGATTTCTCAAATCGCTAACGGTCTCCAAGTGCCTCAAGTTTCATATGCTGCCACTGATCCTACCTTGTCGGCCCTCCAATTTCCTTTCTTTTTTCGTTCTGTACCAAGCGACTCTGTGCAAATGACAGCACTGGCTGAATTAATTGATTTCTTTGGATGGAGAGAGGTCATTGCCGTCTTCTTGGATGATGATTATGGGAGAAATGGAATATCTGCTCTGGGTGATGAACTTGAAAAACGGAGAATAAGGATTGCTCATAAGTTGCCTATTAGCATAAAGTTTGATATGAATGAAATCACTAACTTGCTCAATCATTCCAAAGTGTTTGGTCCTCGTGTGTATGTTGTTCACGTCAACCTAGATCCTAGATTAAGAGTTTTTAACATAGCCCACAAACTTAAAATGATGTCTAGTGATTTTGTTTGGCTTGCCACGGATTGGCTCTCTGCTACTCTAGATTCATTCTCCCCACAGAATCAGACCTCTCTCAGTGTTGTGCAAGGGGTGGTTGGACTACGTCCACACATTCCAGATTCTTTCCAGAAAAGATATTTTGTTTCTCAGTGGAAAAACATGCAGAATGAAAGCGCAGCAGCTATTGGGTTAAACCATTATGGATTTTATGCATATGATTCAATTTGGGCTGTTGCGCATTCAATTGATAAGTTTATTGAAATACATAAGAATATTACATTCTCTGTCAGTAATAACTCAAGGCTATTGAATACAGAAACCACTGACATACGGCTTGAAAAACTCAAAGTCTTCACAGGTGGATCTGATCTGATCAACATATTGTTGCAATCAAATTATACTGGTGTGAGTGGTCACCTTCAATTTAGTCCAGATAGGAATATTGTTAGTGGGGGCTATGAAGTTATCAATATCAATCAGATGGAAATTACCACGGTTGGATATTGGTCTAATGATTTAGGATTTTCAGTGGTTCCTCCTGAAACTCTTAAGAAGAAAGGATATGGTAGGGTTCCCCAAGATCAGAAGCTTAACATTATTACTTGGCCAGGTGGAATGACCGGAAGACCACGTGGATGGGTGATTGCTGATAATGCAAGACCACTGAGAATTGGAGTTCCCAGGAGAGCAAGTTTTGTTGAGTTCGTCACTGAGCTGCCTGGTAGTCATCAAATTCAAGGGTACTGCATTGATATTTTCAAGAAAGCACTGGAGTTTGTACCATATGAAGTCCCCTATGTATTTAAGCCTTTTGGGAACGGTCAATCAAACCCCAATTATGGTGCGCTTGTGCAGACGGTTGCTGACAATGTATTTGATGCGGTTGTCGGAGACATAGCAATTGTGACAAACCGTACAAGGATTGTGGATTTTTCTCAGCCTTTCACATCAACTGGTCTTGTTATAGTGGCTCCAATCAAGAATGCAAAATCAAGTGCTTGGGTATTTCTGAAACCATTTACAGCGGACATGTGGTGCGTCACTGCAGCTTCATTTGTAATGATTGGAGTAGTTATATGGATTCTTGAACACCGAATCAATGATGATTTCCGTGGTCCTCCTAAGAGGCAACTTGTGACGATGTGTATGTTCAGCCTCTCAACCCTGTTTAAGACAAATCAGGAAAATACAGTAAGCTCACTTAGTCGAATGGTGATGATAGTATGGCTTTTTCTGTTGATGGTGATCACGGCTAGCTATACAGCAAGCTTGACTTCAATTCTTACAGTGGAGCAGCTTTCATCACCCATCACTGGCATTGATAGCTTGATTGCAAGTAACTGGCCTATAGGGTACCAAGTAGGTTCGTATGCTTTCAACTATCTGACAGAGAGTCTTTATGTACAAAGATCAAGACTTGTTCCTCTAGGTAACCCTGAAGAATATGCAAGAGCTCTGCAGCTAGGGCCTTCTCGCGGAGGGGTGGCAGCTATAATTGACGAGCTTCCATACATAGAGTTGTTTCTGTCAACACAAACTGATTTTGGTATTATTGGGCAACCATTTACCAAAAGCAGTTGGGGATTTGCTTTTCAAAGAGGGTCTCCTCTCGCCCTTGATATGTCTACAGCAATTCTGAAACTCAATGAGAACGGAGAGCTTCATAAGATACGAGAGCAGTGGCTCTGTAAGATGGGTTGTCCTGAAGAAAGGAGAAGAGATTCAGAGCCTAATCAACTTCACCTGATCAGCTTCTGGGGTCTGTATCTGTCGTGCGGTATTGTCACTCTCGCTTCTCTGCTGGTGTTTCTGCTGCGAACAATTCGCCAATACATCCGATACAAGCAAAGGCAAAAAGATATTCCTTCTGGATCCCGGGAGGGATCTGGCAGTAAATGTTCCCACGTTATCTATAGCTTTTTTAGTTTCATTGATGAGAAGGAAGAAGCCATCAAGAAGATGTTCACTCGTTGTGAGAATCCAGAACAGCAGCCGACGTGA 2739 0.4231 MKHFIAVPGIIWIWIILCGLARCQKPASVNIGAVFTFDSVIGRAAKVAMHMAVDDVNADPIVLNGTKLNLVMEDTNCNVFLGSIGAFRILEQGVAAIIGPQSSSISHVISQIANGLQVPQVSYAATDPTLSALQFPFFFRSVPSDSVQMTALAELIDFFGWREVIAVFLDDDYGRNGISALGDELEKRRIRIAHKLPISIKFDMNEITNLLNHSKVFGPRVYVVHVNLDPRLRVFNIAHKLKMMSSDFVWLATDWLSATLDSFSPQNQTSLSVVQGVVGLRPHIPDSFQKRYFVSQWKNMQNESAAAIGLNHYGFYAYDSIWAVAHSIDKFIEIHKNITFSVSNNSRLLNTETTDIRLEKLKVFTGGSDLINILLQSNYTGVSGHLQFSPDRNIVSGGYEVININQMEITTVGYWSNDLGFSVVPPETLKKKGYGRVPQDQKLNIITWPGGMTGRPRGWVIADNARPLRIGVPRRASFVEFVTELPGSHQIQGYCIDIFKKALEFVPYEVPYVFKPFGNGQSNPNYGALVQTVADNVFDAVVGDIAIVTNRTRIVDFSQPFTSTGLVIVAPIKNAKSSAWVFLKPFTADMWCVTAASFVMIGVVIWILEHRINDDFRGPPKRQLVTMCMFSLSTLFKTNQENTVSSLSRMVMIVWLFLLMVITASYTASLTSILTVEQLSSPITGIDSLIASNWPIGYQVGSYAFNYLTESLYVQRSRLVPLGNPEEYARALQLGPSRGGVAAIIDELPYIELFLSTQTDFGIIGQPFTKSSWGFAFQRGSPLALDMSTAILKLNENGELHKIREQWLCKMGCPEERRRDSEPNQLHLISFWGLYLSCGIVTLASLLVFLLRTIRQYIRYKQRQKDIPSGSREGSGSKCSHVIYSFFSFIDEKEEAIKKMFTRCENPEQQPT 912
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci7g2266 912 PIRSF IGluLR_plant 1 912 IPR017103 -
Prci7g2266 912 CDD GluR_Plant 466 808 - -
Prci7g2266 912 Pfam Ligand-gated ion channel 809 840 IPR001320 GO:0015276|GO:0016020
Prci7g2266 912 Pfam Bacterial extracellular solute-binding proteins, family 3 479 808 IPR001638 -
Prci7g2266 912 PANTHER IONOTROPIC GLUTAMATE RECEPTOR 29 865 IPR015683 -
Prci7g2266 912 Pfam Receptor family ligand binding region 46 405 IPR001828 -
Prci7g2266 912 Gene3D - 47 396 - -
Prci7g2266 912 FunFam Glutamate receptor 144 311 - -
Prci7g2266 912 Gene3D - 756 815 - -
Prci7g2266 912 FunFam Glutamate receptor 463 579 - -
Prci7g2266 912 Gene3D - 579 717 - -
Prci7g2266 912 SUPERFAMILY Periplasmic binding protein-like II 445 808 - -
Prci7g2266 912 SMART GluR_14 469 810 IPR001320 GO:0015276|GO:0016020
Prci7g2266 912 CDD PBP1_GABAb_receptor_plant 30 425 IPR044440 -
Prci7g2266 912 FunFam Glutamate receptor 705 812 - -
Prci7g2266 912 Coils Coil 912 912 - -
Prci7g2266 912 Gene3D - 460 578 - -
Prci7g2266 912 PRINTS Metabotropic gamma-aminobutyric acid type B receptor signature 102 130 - -
Prci7g2266 912 PRINTS Metabotropic gamma-aminobutyric acid type B receptor signature 42 58 - -
Prci7g2266 912 PRINTS Metabotropic gamma-aminobutyric acid type B receptor signature 317 329 - -
Prci7g2266 912 FunFam Glutamate receptor 579 717 - -
Prci7g2266 912 SUPERFAMILY Periplasmic binding protein-like I 23 460 IPR028082 -
Prci7g2266 912 Gene3D - 144 420 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci7g2266 Prci-Chr7 35926812 35932302 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci7g2266 13 912 Ion Channels AT2G32400 56.575 0.0 1048