Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci7g2265 ATGGAGAATGATGTGGTTGCCGTTATTGGTCCACAGTCCTCTGGAATAGCTCATGTGATCTCTCATGTTGTTAATGAACTCCATGTACCACTTTTATCATTTGGGGCAACCGATCCTACTCTTTCTTCCCTGCAATACCCCTATTTCATCCGTACCATTCAAAATGATCATTTCCAGATGTATGCAGTTGCGGACTTGATTGAATATTATGGATGGAGGGAGGTAATTGCTATTTTTGTGGATGATGATAACGGAAGAAATGGAATTTCTGTATTGGGCGATGCACTTGCACAGAGACGTGCCAGGATCTCCTACAAGGCCGCGTTCCCTCCAGATGCTTCCAGATCTGCCATATCTGATCTGTTAAATGGAGTAAACTTAATGGAATCACGAGTTTATGTTCTGCACGTGAATCCTGATTCAGGTTTGGCAATTTTTTCTCTTGCCAAAAAGCTTGGAATGATGAGCAATGGTTATGTTTGGATCGCTACTGATTGGCTTCCTTCGGTGCTTGATTCACAAGCACCGGCGAGCCTTGAGATCTTGAATCTTTTACAAGGTGTTGTTGCATTTCGTCATCACACTCCTTATACTAATATGAAAAATAATCTGCTCTCTAAGTTGAAAAATTTGAACAATCGTAAGACTGCAGGCTTCAATTCTTATGCTTTGTATGCGTATGATTCTGTTAAGCTTGCCGCCCATGCTTTGCATGATTTTCTCAATGATGGTGGAACCATAACTTTCACCAATGACCCTAACTTGCATGACACTAATGAAAGTATGTTGCATTTATCATCACTCCGAACTTTCAATGAGGGCCCCAAGCTTCTCCAGACAATCCTTGGAATGAATTTCACTGGTGTTAGCGGTCCAGTTCAGTTTGACAAGGACAAGAATTTAATTCGCCCAGCTTATGATATTCTAAACATTGGCGCATCAGGACCTCGTATTGTTGGTTATTGGTCTAATCACTCTGGTCTTTCAGACATAGCTCCTGAAACCTTGTACTCAAAATCACCTGACAGGTCAACTGGCAATAAACATCTGTACGGTGTGATATGGCCGGGATTGACATCAATCACACCCAGAGGCTGGGTATTCCCCAATAATGGAAAACCACTGAGAATTGCAGTGCCAAACCGAGTAAGCTACAGGGAGTTTGTTGGCAAAGACAAGGACCCTCCTGGGGTAAGAGGTTATTGCATCGATGTATTTGAAGCCGCGTTAAATTTATTGCCCTATCCTGTTCCGCGGCAATATATACTATATGGACACGGTGATAGAAATCCCAACTATGATGAGATCGTGAACCAGGTCGCACAAAATAAATATGATGCTGCTGTTGGGGATGTTACTATTGTCACAAACAGGACAAGGATTGTGGATTTTACTCAACCTTACATGACTTCAGGGTTGGTTGTTGTTGTTCCTGTCAAAGAGGTGAAGTCAAGTCCTTGGTCTTTCCTCAAGCCATTTACTGCACAAATGTGGTGTGTCACCGGTGCCTTTTTTATTTTTGTTGGAGCTGTTGTATGGATTCTTGAACACCGGCACAATCATGAGTTTCGTGGACGACCGAGAAAACAACTTATGACAATCTTCTGGTTTAGCTTCTCAACAATGTTTTTCTCACACAGAGAGAACACTGTGAGTTCTCTAGGGAGATTGGTGCTAATCATTTGGCTTTTTGTGGTGCTAATTATCAATTCAAGCTACACAGCTAGCTTGACATCCATCCTCACAGTGCAGCAACTTTCATCACAGATTGAAGGCATTGACAGTCTGATCTCAAGTACTCAACCAATTGGAGTTCAAGACGGGTCATTTGCCCGAAACTATCTCATAGATGAGCTTAACATAGCAGCATCAAGAATCGTTATATTGAAGAATCTGGAAGACTATATTGATGCCTTGGAGCGTGGACCCAGAAATGGGGGGGTGGTAGCCGTTGTTGATGAGCTTCCTTATATTGAGCTCCTTATGTCCAGCACGAATTGTGCGTTCAGAACCGTAGGCCAAGAATTTACAAAGAGCGGGTGGGGATTTGCATTTCAGAGGGACTCCCCACTTGCGGTGGACATGTCGACTGCAATTCTGCAACTGTCAGAGAACGGTGACTTGCAAAAGATCCACGACAAGTGGTTACTGAAAAATGAATGTTCTGCGACACAAAACAACGATGAAAATTCAAACCAACTATCGCTGAGCAGCTTCTGGGGGCTGTTCCTCATAAGTGGGATCGCATGTCTGCTTGCATTGATTGCCTTCTGTATAAGGGTGTTTTGTCAGTTCACAAAATTCACTCCAGGCACTGATGAGGAGGCCGACCAGGAAATCATACAGCGCCGCATAGATACTAAACGCCCATGCCGGACTCCTAGTTTCAAGGACTTGATTGAATTTGCAGATAAAAGAGAAGCTGAAATCAAAGAGCAAATGAGAAAGGCTAGAAAGAAACGTGGACGCAGCGAAGCTGAGATGCGATCCAGTTCACCTTTCTAA 2505 0.4323 MENDVVAVIGPQSSGIAHVISHVVNELHVPLLSFGATDPTLSSLQYPYFIRTIQNDHFQMYAVADLIEYYGWREVIAIFVDDDNGRNGISVLGDALAQRRARISYKAAFPPDASRSAISDLLNGVNLMESRVYVLHVNPDSGLAIFSLAKKLGMMSNGYVWIATDWLPSVLDSQAPASLEILNLLQGVVAFRHHTPYTNMKNNLLSKLKNLNNRKTAGFNSYALYAYDSVKLAAHALHDFLNDGGTITFTNDPNLHDTNESMLHLSSLRTFNEGPKLLQTILGMNFTGVSGPVQFDKDKNLIRPAYDILNIGASGPRIVGYWSNHSGLSDIAPETLYSKSPDRSTGNKHLYGVIWPGLTSITPRGWVFPNNGKPLRIAVPNRVSYREFVGKDKDPPGVRGYCIDVFEAALNLLPYPVPRQYILYGHGDRNPNYDEIVNQVAQNKYDAAVGDVTIVTNRTRIVDFTQPYMTSGLVVVVPVKEVKSSPWSFLKPFTAQMWCVTGAFFIFVGAVVWILEHRHNHEFRGRPRKQLMTIFWFSFSTMFFSHRENTVSSLGRLVLIIWLFVVLIINSSYTASLTSILTVQQLSSQIEGIDSLISSTQPIGVQDGSFARNYLIDELNIAASRIVILKNLEDYIDALERGPRNGGVVAVVDELPYIELLMSSTNCAFRTVGQEFTKSGWGFAFQRDSPLAVDMSTAILQLSENGDLQKIHDKWLLKNECSATQNNDENSNQLSLSSFWGLFLISGIACLLALIAFCIRVFCQFTKFTPGTDEEADQEIIQRRIDTKRPCRTPSFKDLIEFADKREAEIKEQMRKARKKRGRSEAEMRSSSPF 834
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci7g2265 834 SMART GluR_14 376 718 IPR001320 GO:0015276|GO:0016020
Prci7g2265 834 FunFam Glutamate receptor 370 486 - -
Prci7g2265 834 Gene3D - 486 607 - -
Prci7g2265 834 FunFam Glutamate receptor 612 720 - -
Prci7g2265 834 SUPERFAMILY Periplasmic binding protein-like II 351 719 - -
Prci7g2265 834 Coils Coil 800 827 - -
Prci7g2265 834 PANTHER IONOTROPIC GLUTAMATE RECEPTOR 7 783 IPR015683 -
Prci7g2265 834 Gene3D - 1 303 - -
Prci7g2265 834 FunFam Glutamate receptor 486 616 - -
Prci7g2265 834 Pfam Ligand-gated ion channel 718 750 IPR001320 GO:0015276|GO:0016020
Prci7g2265 834 CDD GluR_Plant 373 716 - -
Prci7g2265 834 CDD PBP1_GABAb_receptor_plant 2 330 IPR044440 -
Prci7g2265 834 PRINTS Metabotropic glutamate GPCR signature 40 59 IPR000337 GO:0004930|GO:0007186|GO:0016020
Prci7g2265 834 PRINTS Metabotropic glutamate GPCR signature 59 75 IPR000337 GO:0004930|GO:0007186|GO:0016020
Prci7g2265 834 PRINTS Metabotropic glutamate GPCR signature 8 34 IPR000337 GO:0004930|GO:0007186|GO:0016020
Prci7g2265 834 PRINTS Metabotropic glutamate GPCR signature 75 92 IPR000337 GO:0004930|GO:0007186|GO:0016020
Prci7g2265 834 Pfam Receptor family ligand binding region 2 311 IPR001828 -
Prci7g2265 834 Pfam Bacterial extracellular solute-binding proteins, family 3 430 717 IPR001638 -
Prci7g2265 834 MobiDBLite consensus disorder prediction 811 827 - -
Prci7g2265 834 Gene3D - 611 720 - -
Prci7g2265 834 Gene3D - 55 328 - -
Prci7g2265 834 PIRSF IGluLR_plant 1 833 IPR017103 -
Prci7g2265 834 MobiDBLite consensus disorder prediction 811 834 - -
Prci7g2265 834 Gene3D - 370 485 - -
Prci7g2265 834 FunFam Glutamate receptor 55 223 - -
Prci7g2265 834 SUPERFAMILY Periplasmic binding protein-like I 2 366 IPR028082 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci7g2265 Prci-Chr7 35919091 35922771 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci7g2265 1 683 Ion Channels AT1G05200 70.571 0.0 1030
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci7g2265 K05387 - qsa:O6P43_000581 1251.5
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Prci6g0744 6 4966945 4971948 Prci7g2265 7 35919091 35922771 CCT
Prci7g2265 7 35919091 35922771 Prci7g2265 7 35919091 35922771 ECH