Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci7g2264 ATGGCTGTGGCTCCGACATTGTTAGTCCTGGTTTTCTGGTTATGGATTCCCACAGAAGCTGTGGGTAGGACAGGAAATAACACCATGGCAAATAGTACTGTCCCTTCAAGACCGAAAGTTGTGAGGATAGGAGCCCTGTTCACATTTGATTCGATCATCGGAAGATCTGCTAAACCTGCAATTTCGGCTGCTGTTGATGATGTTAATTCTGATACAAGCATTCTCAACGGGATGAAGCTGGAACTTATTTTTCATGATACCAACTGCAGTGGATTTCTTGGAATGGTAGAAGCTTTGCAGTTAATGGAGAATGATGTGGTTGCCGTTATTGGTCCACAGTCCTCTGGAATAGCTCATGTGATCTCTCATGTTGTTAATGAACTCCATGTACCACTTTTATCATTTGGGGCAACCGATCCTACTCTTTCTTCCCTGCAATACCCCTATTTCATCCGTACCATTCAAAATGATCATTTCCAGATGTATGCAGTTGCGGACTTGATTGAATATTATGGATGGAGGGAGGTAATTGCTATTTTTGTGGATGATGATAACGGAAGAAATGGAATTTCTGTATTGGGCGATGCACTTGCACAGAGACGTGCCAGGATCTCCTACAAGGCCGCGTTCCCTCCAGATGCTTCCAGATCTGCCATATCTGATCTGTTAAATGGAGTAAACTTAATGGAATCACGAGTTTATGTTCTGCACGTGAATCCTGATTCAGGTTTGGCAATTTTTTCTCTTGCCAAAAAGCTTGGAATGATGAGCAATGGTTATGTTTGGATCGCTACTGATTGGCTTCCTTCGGTGCTTGATTCACAAGCACCGGCGAGCCTTGAGATCTTGAATCTTTTACAAGGTGTTGTTGCATTTCGTCATCACACTCCTTATACTAATATGAAAAATAATCTGCTCTCTAAGTTGAAAAATTTGAACAATCGTAAGACTGCAGGCTTCAATTCTTATGCTTTGTATGCGTATGATTCTGTTAAGCTTGCCGCCCATGCTTTGCATGATTTTCTCAATGATGGTGGAACCATAACTTTCACCAATGACCCTAACTTGCATGACACTAATGAAAGTATGTTGCATTTATCATCACTCCGAACTTTCAATGAGGGCCCCAAGCTTCTCCAGACAATCCTTGGAATGAATTTCACTGGTGTTAGCGGTCCAGTTCAGTTTGACAAGGACAAGAATTTAATTCGCCCAGCTTATGATATTCTAAACATTGGCGCATCAGGACCTCGTATTGTTGGTTATTGGTCTAATCACTCTGGTCTTTCAGACATAGCTCCTGAAACCTTGTACTCAAAATCACCTGACAGGTCAACTGGCAATAAACATCTGTACGGTGTGATATGGCCGGGATTGACATCAATCACACCCAGAGGCTGGGTATTCCCCAATAATGGAAAACCACTGAGAATTGCAGTGCCAAACCGAGTAAGCTACAGGGAGTTTGTTGGCAAAGACAAGGACCCTCCTGGGGTAAGAGGTTATTGCATCGATGTATTTGAAGCCGCGTTAAATTTATTGCCCTATCCTGTTCCGCGGCAATATATACTATATGGACACGGTGATAGAAATCCCAACTATGATGAGATCGTGAACCAGGTCGCACAAAATAAATATGATGCTGCTGTTGGGGATGTTACTATTGTCACAAACAGGACAAGGATTGTGGATTTTACTCAACCTTACATGACTTCAGGGTTGGTTGTTGTTGTTCCTGTCAAAGAGGTGAAGTCAAGTCCTTGGTCTTTCCTCAAGCCATTTACTGCACAAATGTGGTGTGTCACCGGTGCCTTTTTTATTTTTGTTGGAGCTGTTGTATGGATTCTTGAACACCGGCACAATCATGAGTTTCGTGGACGACCGAGAAAACAACTTATGACAATCTTCTGGTTTAGCTTCTCAACAATGTTTTTCTCACACAGAGAGAACACTGTGAGTTCTCTAGGGAGATTGGTGCTAATCATTTGGCTTTTTGTGGTGCTAATTATCAATTCAAGCTACACAGCTAGCTTGACATCCATCCTCACAGTGCAGCAACTTTCATCACAGATTGAAGGCATTGACAGTCTGATCTCAAGTACTCAACCAATTGGAGTTCAAGACGGGTCATTTGCCCGAAACTATCTCATAGATGAGCTTAACATAGCAGCATCAAGAATCGTTATATTGAAGAATCTGGAAGACTATATTGATGCCTTGGAGCGTGGACCCAGAAATGGGGGGGTGGTAGCCGTTGTTGATGAGCTTCCTTATATTGAGCTCCTTATGTCCAGCACGAATTGTGCGTTCAGAACCGTAGGCCAAGAATTTACAAAGAGCGGGTGGGGATTTGCATTTCAGAGGGACTCCCCACTTGCGGTGGACATGTCGACTGCAATTCTGCAACTGTCAGAGAACGGTGACTTGCAAAAGATCCACGACAAGTGGTTACTGAAAAATGAATGTTCTGCGACACAAAACAACGATGAAAATTCAAACCAACTATCGCTGAGCAGCTTCTGGGGGCTGTTCCTCATAAGTGGGATCGCATGTCTGCTTGCATTGATTGCCTTCTGTATAAGGGTGTTTTGTCAGTTCACAAAATTCACTCCAGGCACTGATGAGGAGGCCGACCAGGAAATCATACAGCGCCGCATAGATACTAAACGCCCATGCCGGACTCCTAGTTTCAAGGACTTGATTGAATTTGCAGATAAAAGAGAAGCTGAAATCAAAGAGCAAATGAGAAAGGCTAGAAAGAAACGTGGACGCAGCGAAGCTGAGATGCGATCCAGTTCACCTTTCTAA 2808 0.4327 MAVAPTLLVLVFWLWIPTEAVGRTGNNTMANSTVPSRPKVVRIGALFTFDSIIGRSAKPAISAAVDDVNSDTSILNGMKLELIFHDTNCSGFLGMVEALQLMENDVVAVIGPQSSGIAHVISHVVNELHVPLLSFGATDPTLSSLQYPYFIRTIQNDHFQMYAVADLIEYYGWREVIAIFVDDDNGRNGISVLGDALAQRRARISYKAAFPPDASRSAISDLLNGVNLMESRVYVLHVNPDSGLAIFSLAKKLGMMSNGYVWIATDWLPSVLDSQAPASLEILNLLQGVVAFRHHTPYTNMKNNLLSKLKNLNNRKTAGFNSYALYAYDSVKLAAHALHDFLNDGGTITFTNDPNLHDTNESMLHLSSLRTFNEGPKLLQTILGMNFTGVSGPVQFDKDKNLIRPAYDILNIGASGPRIVGYWSNHSGLSDIAPETLYSKSPDRSTGNKHLYGVIWPGLTSITPRGWVFPNNGKPLRIAVPNRVSYREFVGKDKDPPGVRGYCIDVFEAALNLLPYPVPRQYILYGHGDRNPNYDEIVNQVAQNKYDAAVGDVTIVTNRTRIVDFTQPYMTSGLVVVVPVKEVKSSPWSFLKPFTAQMWCVTGAFFIFVGAVVWILEHRHNHEFRGRPRKQLMTIFWFSFSTMFFSHRENTVSSLGRLVLIIWLFVVLIINSSYTASLTSILTVQQLSSQIEGIDSLISSTQPIGVQDGSFARNYLIDELNIAASRIVILKNLEDYIDALERGPRNGGVVAVVDELPYIELLMSSTNCAFRTVGQEFTKSGWGFAFQRDSPLAVDMSTAILQLSENGDLQKIHDKWLLKNECSATQNNDENSNQLSLSSFWGLFLISGIACLLALIAFCIRVFCQFTKFTPGTDEEADQEIIQRRIDTKRPCRTPSFKDLIEFADKREAEIKEQMRKARKKRGRSEAEMRSSSPF 935
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci7g2264 935 Coils Coil 901 928 - -
Prci7g2264 935 FunFam Glutamate receptor 713 821 - -
Prci7g2264 935 FunFam Glutamate receptor 471 587 - -
Prci7g2264 935 PIRSF IGluLR_plant 1 934 IPR017103 -
Prci7g2264 935 Gene3D - 156 429 - -
Prci7g2264 935 PANTHER IONOTROPIC GLUTAMATE RECEPTOR 42 884 IPR015683 -
Prci7g2264 935 SMART GluR_14 477 819 IPR001320 GO:0015276|GO:0016020
Prci7g2264 935 SUPERFAMILY Periplasmic binding protein-like II 452 820 - -
Prci7g2264 935 CDD PBP1_GABAb_receptor_plant 42 431 IPR044440 -
Prci7g2264 935 SUPERFAMILY Periplasmic binding protein-like I 36 467 IPR028082 -
Prci7g2264 935 MobiDBLite consensus disorder prediction 912 935 - -
Prci7g2264 935 Gene3D - 60 404 - -
Prci7g2264 935 PRINTS Metabotropic gamma-aminobutyric acid type B receptor signature 54 70 - -
Prci7g2264 935 PRINTS Metabotropic gamma-aminobutyric acid type B receptor signature 114 142 - -
Prci7g2264 935 PRINTS Metabotropic gamma-aminobutyric acid type B receptor signature 245 268 - -
Prci7g2264 935 Gene3D - 712 821 - -
Prci7g2264 935 Gene3D - 471 586 - -
Prci7g2264 935 FunFam Glutamate receptor 587 717 - -
Prci7g2264 935 MobiDBLite consensus disorder prediction 912 928 - -
Prci7g2264 935 Gene3D - 587 708 - -
Prci7g2264 935 Pfam Receptor family ligand binding region 58 412 IPR001828 -
Prci7g2264 935 CDD GluR_Plant 474 817 - -
Prci7g2264 935 FunFam Glutamate receptor 156 324 - -
Prci7g2264 935 Pfam Ligand-gated ion channel 819 851 IPR001320 GO:0015276|GO:0016020
Prci7g2264 935 Pfam Bacterial extracellular solute-binding proteins, family 3 531 818 IPR001638 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci7g2264 Prci-Chr7 35919091 35923353 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci7g2264 37 784 Ion Channels AT1G05200 70.053 0.0 1124
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci7g2264 K05387 - qsa:O6P43_028681 1372.45