Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci7g2256 ATGTTCCAGCCAAACATGATGGAAGGTCAGCTACACCCATTGGACATGGCTCCCAACACCTCCGAGAGCGACGTACCCCGCATCCGAGGAGAAGACTTCGACAGTGCCACCAAGTCCGGCAGTGAAAACCAGGAAGGCGCCTCCGGCGACGACCATGATCCCCGCCCCAAAAAGAAGCGCTACCACCGCCACACGCAGCACCAGATCCAGGAAATGGAAGCTTTCTTTAAGGAGTGCCCGCATCCAGATGACAAGCAGAGAAAGGAACTGAGCCGAGAATTAGGGTTAGAGCCATTGCAGGTCAAGTTTTGGTTCCAAAACAAGCGAACTCAGATGAAGACCCAACATGAGCGGCAAGAGAACTCACAACTTAGAGCCGAAAATGAGAAGCTTCGAGCAGACAACATGAGGTACAGGGAAGCTCTTAGCAATGCCTCATGTCCAAACTGTGGTGGACCAACCGCCATTGGTGAAATGTCTTTTGATGAGCATCATTTGAGAATGGAAAATGCCCGTCTACGAGAAGAGATTGACAGGATTTCGGCAATTGCTGCAAAGTACGTGGGGAAGCCGGTGGTGAACTATCCACTGCTTCCCCCAACTGTTCCTCCACGTCCACTGGAACTGGGTGTGGGTGGTTTTGGTGAGGACGCATACGGAGGTGGAGATGTTGTTAGGTCTATGAGTGGGCCTACGGATGCTGATAAGCCAATAATAATAGAGCTAGCTGTGGCTGCCATGGAAGAGCTGGTGAGGATGGCACAAATGGGTGATCCCTTATGGCTGACCACTCTTGATGGAACCACCACTGTGCTTAACGAGGATGAATATATCAGAAGTTTCCCTCGTGGTATTGGTCCAAAACCTACTGGATTCAAGTGTGAAGCTTCTCGAGAAACTGCTGTTGTCATCATGGACCATATTAATCTTGTTGAGATTCTCATGGATGTGAATCAATGGTATACAGTGTTCTCAGGGATAGTCTCAAGAGCAATGACTCTTGAAGTATTATCAACAGGGGTGGCTGGGAACTACAACGGAGCCTTGCAAGTGATGACGGCAGAGCTACAAGTACCTACACCTCTGGTGCCATCTCGAGAGAGTTATTTTGTAAGATATTGCAAACAACACGGGGAAGGGACATGGGCAGTGGTGGATGTGTCGTTAGATAATTTGCGCCCTAGTCCTTCACTTAGATGTAGAAGAAGGCCCTCCGGCTGCTTAATTCATGAAATGCCTAATGGCTACTCGAAGGTGACGTGGGTTGAGCACGTAGAAGTGGACGATCGAGGAGTTCATGATCTATACAAGCAGCTCGTCAGCTCTGGACATGCTTTCGGGGCAAAACGTTGGGTGGCTACTTTGGATCGACAATGTGAAAGGCTTGCCAGTTCCATGGCAACCAATATTCCCACTGGTGATGTTGGCGTGATAACCAGCCAAGAAGGGAGGAAGAGTATGCTGAAACTGGCAGAGAGAATGGTGATGAGCTTTTGTGCCGGAGTGGGTGCTTCTACTGCTCACACGTGGACTACACTGTCTGGAACCGGGGCAGACGATGTAAGGGTCATGACCCGTAAGAGTGTGGATGATCCTGGAAGGCCTCCTGGTATTGTTCTCAGTGCTGCAACTTCTTTTTGGCTTCCAGTTCCTCCTATTAGAGTTTTTGATTTCCTCCGCGATGAGAACTCCAGAAGTGAGTGGGATATTCTTTCGAATGGCGGAGTAGTCCAAGAAATGGCACATATAGCTAATGGTCAGGACACAGGGAATTGTGTATCTCTACTTCGGGTAAATAGTGCGAATTCCAGCCAAAGCAATATGTTAATACTGCAAGAAAGCTGCAGAGACGCGACGGGGTCGTTTGTGATATATGCACCCGTGGATATAGTTGCAATGAACGTGGTTCTGAATGGAGGGGACCCAGACTACGTGGCCCTTCTTCCTTCTGGATTCGCTATACTGCCGGATGGAACCATGGCACATGGTGGATCTCTCTTGACTGTTGCTTTCCAAATTTTGGTCGACTCAGTTCCGACAGCCAAACTCTCTCTCGGATCTGTTGCCACTGTCAATAATCTCATTGCCTGCACTGTTGAGAGAATCAAGGCTTCTTTGTCCTGTGAAGCTGCCTGA 2136 0.492 MFQPNMMEGQLHPLDMAPNTSESDVPRIRGEDFDSATKSGSENQEGASGDDHDPRPKKKRYHRHTQHQIQEMEAFFKECPHPDDKQRKELSRELGLEPLQVKFWFQNKRTQMKTQHERQENSQLRAENEKLRADNMRYREALSNASCPNCGGPTAIGEMSFDEHHLRMENARLREEIDRISAIAAKYVGKPVVNYPLLPPTVPPRPLELGVGGFGEDAYGGGDVVRSMSGPTDADKPIIIELAVAAMEELVRMAQMGDPLWLTTLDGTTTVLNEDEYIRSFPRGIGPKPTGFKCEASRETAVVIMDHINLVEILMDVNQWYTVFSGIVSRAMTLEVLSTGVAGNYNGALQVMTAELQVPTPLVPSRESYFVRYCKQHGEGTWAVVDVSLDNLRPSPSLRCRRRPSGCLIHEMPNGYSKVTWVEHVEVDDRGVHDLYKQLVSSGHAFGAKRWVATLDRQCERLASSMATNIPTGDVGVITSQEGRKSMLKLAERMVMSFCAGVGASTAHTWTTLSGTGADDVRVMTRKSVDDPGRPPGIVLSAATSFWLPVPPIRVFDFLRDENSRSEWDILSNGGVVQEMAHIANGQDTGNCVSLLRVNSANSSQSNMLILQESCRDATGSFVIYAPVDIVAMNVVLNGGDPDYVALLPSGFAILPDGTMAHGGSLLTVAFQILVDSVPTAKLSLGSVATVNNLIACTVERIKASLSCEAA 711
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci7g2256 711 CDD START_ArGLABRA2_like 236 460 - -
Prci7g2256 711 SUPERFAMILY Homeodomain-like 45 115 IPR009057 -
Prci7g2256 711 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN MERISTEM L1 55 706 IPR042160 -
Prci7g2256 711 ProSiteProfiles 'Homeobox' domain profile. 55 115 IPR001356 GO:0003677
Prci7g2256 711 Gene3D - 292 457 IPR023393 -
Prci7g2256 711 MobiDBLite consensus disorder prediction 1 66 - -
Prci7g2256 711 Gene3D - 43 132 - -
Prci7g2256 711 SUPERFAMILY Bet v1-like 232 463 - -
Prci7g2256 711 ProSiteProfiles START domain profile. 232 464 IPR002913 GO:0008289
Prci7g2256 711 Coils Coil 114 141 - -
Prci7g2256 711 CDD homeodomain 58 116 IPR001356 GO:0003677
Prci7g2256 711 SMART START_1 241 461 IPR002913 GO:0008289
Prci7g2256 711 FunFam Homeobox-leucine zipper protein GLABRA 2 241 460 - -
Prci7g2256 711 SUPERFAMILY Bet v1-like 481 703 - -
Prci7g2256 711 SMART HOX_1 56 119 IPR001356 GO:0003677
Prci7g2256 711 ProSitePatterns 'Homeobox' domain signature. 90 113 IPR017970 GO:0000981|GO:0006355
Prci7g2256 711 Pfam START domain 242 461 IPR002913 GO:0008289
Prci7g2256 711 FunFam Homeobox-leucine zipper protein HDG1 43 131 - -
Prci7g2256 711 Pfam Homeodomain 58 113 IPR001356 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci7g2256 Prci-Chr7 35899195 35904655 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci7g2256 1 711 Homeobox Transcription Factor Family AT1G05230 77.123 0.0 1146
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-HD-ZIP Prci7g2256 START 3.3e-58 CL0209
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci7g2256 K09338 - zju:107417085 1273.07