Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci7g2254 ATGATGGAAGGTCAGCTACACCCATTGGACATGGCTCCCAACACCTCCGAGAGCGACGTACCCCGCATCCGAGGAGAAGACTTCGACAGTGCCACCAAGTCCGGCAGTGAAAACCAGGAAGGCGCCTCCGGCGACGACCATGATCCCCGCCCCAAAAAGAAGCGCTACCACCGCCACACGCAGCACCAGATCCAGGAAATGGAAGCTTTCTTTAAGGAGTGCCCGCATCCAGATGACAAGCAGAGAAAGGAACTGAGCCGAGAATTAGGGTTAGAGCCATTGCAGGTCAAGTTTTGGTTCCAAAACAAGCGAACTCAGATGAAGACCCAACATGAGCGGCAAGAGAACTCACAACTTAGAGCCGAAAATGAGAAGCTTCGAGCAGACAACATGAGGTACAGGGAAGCTCTTAGCAATGCCTCATGTCCAAACTGTGGTGGACCAACCGCCATTGGTGAAATGTCTTTTGATGAGCATCATTTGAGAATGGAAAATGCCCGTCTACGAGAAGAGATTGACAGGATTTCGGCAATTGCTGCAAAGTACGTGGGGAAGCCGGTGGTGAACTATCCACTGCTTCCCCCAACTGTTCCTCCACGTCCACTGGAACTGGGTGTGGGTGGTTTTGGTGAGGACGCATACGGAGGTGGAGATGTTGTTAGGTCTATGAGTGGGCCTACGGATGCTGATAAGCCAATAATAATAGAGCTAGCTGTGGCTGCCATGGAAGAGCTGGTGAGGATGGCACAAATGGGTGATCCCTTATGGCTGACCACTCTTGATGGAACCACCACTGTGCTTAACGAGGATGAATATATCAGAAGTTTCCCTCGTGGTATTGGTCCAAAACCTACTGGATTCAAGTGTGAAGCTTCTCGAGAAACTGCTGTTGTCATCATGGACCATATTAATCTTGTTGAGATTCTCATGGATGTGAATCAATGGTATACAGTGTTCTCAGGGATAGTCTCAAGAGCAATGACTCTTGAAGTATTATCAACAGGGGTGGCTGGGAACTACAACGGAGCCTTGCAAGTGATGACGGCAGAGCTACAAGTACCTACACCTCTGGTGCCATCTCGAGAGAGTTATTTTGTAAGATATTGCAAACAACACGGGGAAGGGACATGGGCAGTGGTGGATGTGTCGTTAGATAATTTGCGCCCTAGTCCTTCACTTAGATGTAGAAGAAGGCCCTCCGGCTGCTTAATTCATGAAATGCCTAATGGCTACTCGAAGGTGACGTGGGTTGAGCACGTAGAAGTGGACGATCGAGGAGTTCATGATCTATACAAGCAGCTCGTCAGCTCTGGACATGCTTTCGGGGCAAAACGTTGGGTGGCTACTTTGGATCGACAATGTGAAAGGCTTGCCAGTTCCATGGCAACCAATATTCCCACTGGTGATGTTGGCGTGATAACCAGCCAAGAAGGGAGGAAGAGTATGCTGAAACTGGCAGAGAGAATGGTGATGAGCTTTTGTGCCGGAGTGGGTGCTTCTACTGCTCACACGTGGACTACACTGTCTGGAACCGGGGCAGACGATGTAAGGGTCATGACCCGTAAGAGTGTGGATGATCCTGGAAGGCCTCCTGGTATTGTTCTCAGTGCTGCAACTTCTTTTTGGCTTCCAGTTCCTCCTATTAGAGTTTTTGATTTCCTCCGCGATGAGAACTCCAGAAGTGAGTGGGATATTCTTTCGAATGGCGGAGTAGTCCAAGAAATGGCACATATAGCTAATGGTCAGGACACAGGGAATTGTGTATCTCTACTTCGGGTAAATAGTGCGAATTCCAGCCAAAGCAATATGTTAATACTGCAAGAAAGCTGCAGAGACGCGACGGGGTCGTTTGTGATATATGCACCCGTGGATATAGTTGCAATGAACGTGGTTCTGAATGGAGGGGACCCAGACTACGTGGCCCTTCTTCCTTCTGGATTCGCTATACTGCCGGATGGAACCATGGCACATGGTGGATCTCTCTTGACTGTTGCTTTCCAAATTTTGGTCGACTCAGTTCCGACAGCCAAACTCTCTCTCGGATCTGTTGCCACTGTCAATAATCTCATTGCCTGCACTGTTGAGAGAATCAAGGCTTCTTTGTCCTGTGAAGCTGCCTGA 2121 0.4922 MMEGQLHPLDMAPNTSESDVPRIRGEDFDSATKSGSENQEGASGDDHDPRPKKKRYHRHTQHQIQEMEAFFKECPHPDDKQRKELSRELGLEPLQVKFWFQNKRTQMKTQHERQENSQLRAENEKLRADNMRYREALSNASCPNCGGPTAIGEMSFDEHHLRMENARLREEIDRISAIAAKYVGKPVVNYPLLPPTVPPRPLELGVGGFGEDAYGGGDVVRSMSGPTDADKPIIIELAVAAMEELVRMAQMGDPLWLTTLDGTTTVLNEDEYIRSFPRGIGPKPTGFKCEASRETAVVIMDHINLVEILMDVNQWYTVFSGIVSRAMTLEVLSTGVAGNYNGALQVMTAELQVPTPLVPSRESYFVRYCKQHGEGTWAVVDVSLDNLRPSPSLRCRRRPSGCLIHEMPNGYSKVTWVEHVEVDDRGVHDLYKQLVSSGHAFGAKRWVATLDRQCERLASSMATNIPTGDVGVITSQEGRKSMLKLAERMVMSFCAGVGASTAHTWTTLSGTGADDVRVMTRKSVDDPGRPPGIVLSAATSFWLPVPPIRVFDFLRDENSRSEWDILSNGGVVQEMAHIANGQDTGNCVSLLRVNSANSSQSNMLILQESCRDATGSFVIYAPVDIVAMNVVLNGGDPDYVALLPSGFAILPDGTMAHGGSLLTVAFQILVDSVPTAKLSLGSVATVNNLIACTVERIKASLSCEAA 706
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci7g2254 706 ProSiteProfiles START domain profile. 227 459 IPR002913 GO:0008289
Prci7g2254 706 SUPERFAMILY Bet v1-like 227 458 - -
Prci7g2254 706 CDD START_ArGLABRA2_like 231 455 - -
Prci7g2254 706 SMART HOX_1 51 114 IPR001356 GO:0003677
Prci7g2254 706 SMART START_1 236 456 IPR002913 GO:0008289
Prci7g2254 706 MobiDBLite consensus disorder prediction 1 61 - -
Prci7g2254 706 ProSitePatterns 'Homeobox' domain signature. 85 108 IPR017970 GO:0000981|GO:0006355
Prci7g2254 706 Pfam START domain 237 456 IPR002913 GO:0008289
Prci7g2254 706 SUPERFAMILY Bet v1-like 476 698 - -
Prci7g2254 706 ProSiteProfiles 'Homeobox' domain profile. 50 110 IPR001356 GO:0003677
Prci7g2254 706 Gene3D - 287 452 IPR023393 -
Prci7g2254 706 FunFam Homeobox-leucine zipper protein HDG1 38 126 - -
Prci7g2254 706 FunFam Homeobox-leucine zipper protein GLABRA 2 236 455 - -
Prci7g2254 706 SUPERFAMILY Homeodomain-like 40 110 IPR009057 -
Prci7g2254 706 Gene3D - 38 127 - -
Prci7g2254 706 Coils Coil 109 136 - -
Prci7g2254 706 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN MERISTEM L1 50 701 IPR042160 -
Prci7g2254 706 Pfam Homeodomain 53 108 IPR001356 GO:0003677
Prci7g2254 706 CDD homeodomain 53 111 IPR001356 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci7g2254 Prci-Chr7 35899195 35904655 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci7g2254 23 706 Homeobox Transcription Factor Family AT1G05230 79.741 0.0 1142
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-HD-ZIP Prci7g2254 START 3.3e-58 CL0209
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci7g2254 K09338 - zju:107417085 1261.9