Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci7g2253 ATGCCGGTCGGCATGATGATTCCGGCGAGAAATATGACGTCCGTGATTGGAAGGAACGGCAACGTTGGTGGATTTGGATCACCCTCAAGTCTCACTCTCGGCCAGCCAAACATGATGGAAGGTCAGCTACACCCATTGGACATGGCTCCCAACACCTCCGAGAGCGACGTACCCCGCATCCGAGGAGAAGACTTCGACAGTGCCACCAAGTCCGGCAGTGAAAACCAGGAAGGCGCCTCCGGCGACGACCATGATCCCCGCCCCAAAAAGAAGCGCTACCACCGCCACACGCAGCACCAGATCCAGGAAATGGAAGCTTTCTTTAAGGAGTGCCCGCATCCAGATGACAAGCAGAGAAAGGAACTGAGCCGAGAATTAGGGTTAGAGCCATTGCAGGTCAAGTTTTGGTTCCAAAACAAGCGAACTCAGATGAAGACCCAACATGAGCGGCAAGAGAACTCACAACTTAGAGCCGAAAATGAGAAGCTTCGAGCAGACAACATGAGGTACAGGGAAGCTCTTAGCAATGCCTCATGTCCAAACTGTGGTGGACCAACCGCCATTGGTGAAATGTCTTTTGATGAGCATCATTTGAGAATGGAAAATGCCCGTCTACGAGAAGAGATTGACAGGATTTCGGCAATTGCTGCAAAGTACGTGGGGAAGCCGGTGGTGAACTATCCACTGCTTCCCCCAACTGTTCCTCCACGTCCACTGGAACTGGGTGTGGGTGGTTTTGGTGAGGACGCATACGGAGGTGGAGATGTTGTTAGGTCTATGAGTGGGCCTACGGATGCTGATAAGCCAATAATAATAGAGCTAGCTGTGGCTGCCATGGAAGAGCTGGTGAGGATGGCACAAATGGGTGATCCCTTATGGCTGACCACTCTTGATGGAACCACCACTGTGCTTAACGAGGATGAATATATCAGAAGTTTCCCTCGTGGTATTGGTCCAAAACCTACTGGATTCAAGTGTGAAGCTTCTCGAGAAACTGCTGTTGTCATCATGGACCATATTAATCTTGTTGAGATTCTCATGGATGTGAATCAATGGTATACAGTGTTCTCAGGGATAGTCTCAAGAGCAATGACTCTTGAAGTATTATCAACAGGGGTGGCTGGGAACTACAACGGAGCCTTGCAAGTGATGACGGCAGAGCTACAAGTACCTACACCTCTGGTGCCATCTCGAGAGAGTTATTTTGTAAGATATTGCAAACAACACGGGGAAGGGACATGGGCAGTGGTGGATGTGTCGTTAGATAATTTGCGCCCTAGTCCTTCACTTAGATGTAGAAGAAGGCCCTCCGGCTGCTTAATTCATGAAATGCCTAATGGCTACTCGAAGGTGACGTGGGTTGAGCACGTAGAAGTGGACGATCGAGGAGTTCATGATCTATACAAGCAGCTCGTCAGCTCTGGACATGCTTTCGGGGCAAAACGTTGGGTGGCTACTTTGGATCGACAATGTGAAAGGCTTGCCAGTTCCATGGCAACCAATATTCCCACTGGTGATGTTGGCGTGATAACCAGCCAAGAAGGGAGGAAGAGTATGCTGAAACTGGCAGAGAGAATGGTGATGAGCTTTTGTGCCGGAGTGGGTGCTTCTACTGCTCACACGTGGACTACACTGTCTGGAACCGGGGCAGACGATGTAAGGGTCATGACCCGTAAGAGTGTGGATGATCCTGGAAGGCCTCCTGGTATTGTTCTCAGTGCTGCAACTTCTTTTTGGCTTCCAGTTCCTCCTATTAGAGTTTTTGATTTCCTCCGCGATGAGAACTCCAGAAGTGAGTGGGATATTCTTTCGAATGGCGGAGTAGTCCAAGAAATGGCACATATAGCTAATGGTCAGGACACAGGGAATTGTGTATCTCTACTTCGGGTAAATAGTGCGAATTCCAGCCAAAGCAATATGTTAATACTGCAAGAAAGCTGCAGAGACGCGACGGGGTCGTTTGTGATATATGCACCCGTGGATATAGTTGCAATGAACGTGGTTCTGAATGGAGGGGACCCAGACTACGTGGCCCTTCTTCCTTCTGGATTCGCTATACTGCCGGATGGAACCATGGCACATGGTGGATCTCTCTTGACTGTTGCTTTCCAAATTTTGGTCGACTCAGTTCCGACAGCCAAACTCTCTCTCGGATCTGTTGCCACTGTCAATAATCTCATTGCCTGCACTGTTGAGAGAATCAAGGCTTCTTTGTCCTGTGAAGCTGCCTGA 2232 0.4946 MPVGMMIPARNMTSVIGRNGNVGGFGSPSSLTLGQPNMMEGQLHPLDMAPNTSESDVPRIRGEDFDSATKSGSENQEGASGDDHDPRPKKKRYHRHTQHQIQEMEAFFKECPHPDDKQRKELSRELGLEPLQVKFWFQNKRTQMKTQHERQENSQLRAENEKLRADNMRYREALSNASCPNCGGPTAIGEMSFDEHHLRMENARLREEIDRISAIAAKYVGKPVVNYPLLPPTVPPRPLELGVGGFGEDAYGGGDVVRSMSGPTDADKPIIIELAVAAMEELVRMAQMGDPLWLTTLDGTTTVLNEDEYIRSFPRGIGPKPTGFKCEASRETAVVIMDHINLVEILMDVNQWYTVFSGIVSRAMTLEVLSTGVAGNYNGALQVMTAELQVPTPLVPSRESYFVRYCKQHGEGTWAVVDVSLDNLRPSPSLRCRRRPSGCLIHEMPNGYSKVTWVEHVEVDDRGVHDLYKQLVSSGHAFGAKRWVATLDRQCERLASSMATNIPTGDVGVITSQEGRKSMLKLAERMVMSFCAGVGASTAHTWTTLSGTGADDVRVMTRKSVDDPGRPPGIVLSAATSFWLPVPPIRVFDFLRDENSRSEWDILSNGGVVQEMAHIANGQDTGNCVSLLRVNSANSSQSNMLILQESCRDATGSFVIYAPVDIVAMNVVLNGGDPDYVALLPSGFAILPDGTMAHGGSLLTVAFQILVDSVPTAKLSLGSVATVNNLIACTVERIKASLSCEAA 743
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci7g2253 743 Gene3D - 75 164 - -
Prci7g2253 743 CDD START_ArGLABRA2_like 268 492 - -
Prci7g2253 743 SMART HOX_1 88 151 IPR001356 GO:0003677
Prci7g2253 743 ProSiteProfiles 'Homeobox' domain profile. 87 147 IPR001356 GO:0003677
Prci7g2253 743 Gene3D - 324 489 IPR023393 -
Prci7g2253 743 FunFam Homeobox-leucine zipper protein GLABRA 2 273 492 - -
Prci7g2253 743 Pfam START domain 274 493 IPR002913 GO:0008289
Prci7g2253 743 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN MERISTEM L1 87 738 IPR042160 -
Prci7g2253 743 MobiDBLite consensus disorder prediction 26 98 - -
Prci7g2253 743 FunFam Homeobox-leucine zipper protein HDG1 75 163 - -
Prci7g2253 743 Pfam Homeodomain 90 145 IPR001356 GO:0003677
Prci7g2253 743 CDD homeodomain 90 148 IPR001356 GO:0003677
Prci7g2253 743 Coils Coil 146 173 - -
Prci7g2253 743 ProSiteProfiles START domain profile. 264 496 IPR002913 GO:0008289
Prci7g2253 743 SUPERFAMILY Bet v1-like 513 735 - -
Prci7g2253 743 SMART START_1 273 493 IPR002913 GO:0008289
Prci7g2253 743 ProSitePatterns 'Homeobox' domain signature. 122 145 IPR017970 GO:0000981|GO:0006355
Prci7g2253 743 SUPERFAMILY Homeodomain-like 77 147 IPR009057 -
Prci7g2253 743 SUPERFAMILY Bet v1-like 264 495 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci7g2253 Prci-Chr7 35899195 35904655 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci7g2253 60 743 Homeobox Transcription Factor Family AT1G05230 79.741 0.0 1142
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-HD-ZIP Prci7g2253 START 3.6e-58 CL0209
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci7g2253 K09338 - cave:132180993 1312.36