Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci7g2242 ATGGTGGAGCGGAAGCAGTTCAAGACCAGGCTATGTGTACCATATCAGAAAGGCCGGTGTCCACGCCAAAATTGCACCTTTGCCCATGGGAATGCGGAGCTGCGGCGATTCTCTGGCTCGTATAGTGGTAGGCAAGACTATTCAGGCGGTGACTTGAGAGGAAAACTTGAAAGAAGGCACTTATCCCCTCGCAGGTTATCACCAGCTAGAGATGCAAGGAGCCGCCAAAACATTCATGAATACAGCCCTGGGAGGTCCTTGGAGAAAAGAAGTGATAGGAAGCGCAAGAGAGACAAGGGCATTGCAGGACAAACTGGTGTTTCTGGAAGCTTGAGATTCTCTGATAGAATCCAGGATAAAGTTAAAGAAGGAAAACTGCATTCCTCTGGTTCAAAAAATAGTCTTGAGGAGCAGCTGGAAAAAGTACAGACAGAAATCAACATGCTTGACCAGCAAAAGTTTCAACTTGGGGTCTGCTTGGATGAGAGTGTTCAAGAAGTGGATACCCTTAATTCTAGAATTCAGGAACTTCAGGCTCAATTATGCAAAGAGAATGAAGACTGTAAAAGGGTCACGTCAAAAATAAGGAAGTTTGTTAAAGCACATAATCATAATGCTCGGTTACAAGATGAATTAAAGAGATCACAAGCTCGACTTCAAAGGTTGGGAGATCAGCTTGACTCAGACATAGCTAGAATTGGTGTCAATGAAGAAGACTTGAGTATTGATATTGTAAGCAATGCTGAGGATGCAGGTTTTCCTTCCATCTTCAAAGATAATGTGGAGCAGAATGATGCTTCTCCGCACAGAAAAAGGCTGCCTTTTGGCCAAGATGCTGTTGAAGAAACAAGACAAGCCAGAACCAGGAAGCGTTCTCGGTGGAGTTTGGCTGCTCAATCAAATGATAAGGAGTATGAAGGCCTTGAGGCCCCAAATAATGGGACTCAAGCAACTAAGCCCCATAATATTGAGGGCAGGCCAAAGAAAGGAACATCTAGTTCTTCTGGCAACCTTGGCGTAGAAAAGTTGAAGGAAAGTAGGGTTGGTGTGCCATTAACCAGCATGGCAGCTCATGTGGTTGATGAGGAAGTTGAGATTGAGCTGGATGACAACATTGAGAAAATTGAAACCGCACCTGCAGAAAATGAAAATGAAGTGGCATTTAAGGTGAGGAGTTTACCACTGCTGCCCCCAACCCTTAGTTCTTCTGGAACGAATTATTCACAGTATGAGGGTGATGATGAGAATGTGGATGTGGATGTGGCTTGA 1269 0.4452 MVERKQFKTRLCVPYQKGRCPRQNCTFAHGNAELRRFSGSYSGRQDYSGGDLRGKLERRHLSPRRLSPARDARSRQNIHEYSPGRSLEKRSDRKRKRDKGIAGQTGVSGSLRFSDRIQDKVKEGKLHSSGSKNSLEEQLEKVQTEINMLDQQKFQLGVCLDESVQEVDTLNSRIQELQAQLCKENEDCKRVTSKIRKFVKAHNHNARLQDELKRSQARLQRLGDQLDSDIARIGVNEEDLSIDIVSNAEDAGFPSIFKDNVEQNDASPHRKRLPFGQDAVEETRQARTRKRSRWSLAAQSNDKEYEGLEAPNNGTQATKPHNIEGRPKKGTSSSSGNLGVEKLKESRVGVPLTSMAAHVVDEEVEIELDDNIEKIETAPAENENEVAFKVRSLPLLPPTLSSSGTNYSQYEGDDENVDVDVA 422
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci7g2242 422 Gene3D - 1 36 - -
Prci7g2242 422 Coils Coil 132 152 - -
Prci7g2242 422 MobiDBLite consensus disorder prediction 396 412 - -
Prci7g2242 422 PANTHER ZINC FINGER CCCH DOMAIN-CONTAINING PROTEIN 40 1 421 IPR045868 GO:0046872
Prci7g2242 422 MobiDBLite consensus disorder prediction 50 101 - -
Prci7g2242 422 ProSiteProfiles Zinc finger C3H1-type profile. 6 32 IPR000571 GO:0046872
Prci7g2242 422 Coils Coil 160 180 - -
Prci7g2242 422 MobiDBLite consensus disorder prediction 261 342 - -
Prci7g2242 422 MobiDBLite consensus disorder prediction 263 289 - -
Prci7g2242 422 MobiDBLite consensus disorder prediction 395 422 - -
Prci7g2242 422 MobiDBLite consensus disorder prediction 39 114 - -
Prci7g2242 422 SUPERFAMILY Troponin coil-coiled subunits 122 197 IPR038077 -
Prci7g2242 422 Coils Coil 205 225 - -
Prci7g2242 422 SUPERFAMILY CCCH zinc finger 4 35 IPR036855 GO:0046872
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci7g2242 Prci-Chr7 35824494 35831518 Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C3H Prci7g2242 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci7g2242 - - gmx:100811131 475.707