Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci7g2241 ATGGAGTCCATTTGCCCAATAGACTCGCGGTGTGCCAATGAAATTGCAGCTCTTCTCAGTCCTCCGTCACCTCTTCAAGTCCAGGAATATTATCACAAGCTTTTATCTGCGAGGAAGTGCAGTAGTATCATAGTCCAACAGGATGAAAATTTTGGAAAGGGTGTGTATGCTGCCATAGACTTCAATGACGCAGAGCTTGTTCTGAAAGATCAAATGCTAGTTGGGGTTCAACACTCTTCCAACAAGATTGATTGTTTTGTCTGTAGTTCCTGCTTTTGTTTTCTTGGTTCTATAGAACTTCAAATCGGAAGGAGGCTTTACATGCAAGAAGTAGGGGCATCTGAGAGTCATAATTGTGATATGAGTGACTCTTCAAACGCATCAAAATACAATAATGACACATATTCATCTGATGGAGAAGAAAGTTCATATAAAAAAAGGGAGGATGGCGCTGGTGAATGTAGTTTTAGTAGTCCTGAAGCTAAAGTTCATGTCCCTGAAGGAGTTGTTCAATCATTAATGAACGGCCACATGATGCTTCCTTACTCCAACAAGTTCTCCTTGCCACCAGCTGTTCCATGCCCTGGTGGATGTGGAGAGTCATTCTACTGCAGCACATCATGTGCAGAGGCTGATTGGAAATCCTGTCATTCTTTGATTTGTACTGGTGAGAAGTCTGATACAGCACGTAGGGAGGCACTTCTAAAATTCATCAAACATGCTAATGAAACAAACGATATATTCCTCCTTGCTGCAAAGGCTATTTCTTCCACCATTGTAAGGTGGTGGGACTGCGTTGCATTGCCAGATGATATTAATTCTTATGATGAAGTTGCATTCAGGATGCAAATAAGAGATCTGGCATTTGAGTCACTCCAACTTCTAAAGAAAGCTATATTTGACAGAGAGTGTGAACCATTATTCTCCCTGGAAATATATGGGCACATCATTGGCATGTTTGAGCAAAACAATCTTGATTTGGTAGTAGCTTCTCCTGTGGAGGATTACTTTTTGTACATTGACAATCTAACATATCCTGAAAAGGAAAAAGCTGAGGAAATTACACAACCAATTCTGGATGCTCTTGGTGAAGACTATTCAATTTGTTGCCAGGGAACTGCTTTTTTTCCTTTGCAAAGCTGCATGAACCATTCTTGTTGTCCTAATGCCAAGGCATTCAAAAGAGAGGAGGATAGAGATGGTCAAGCAACAATAATTGCATTGACGTCAATTCGTAAAGGAGAAGAGATAACCATCTCATATGTCGATGAGGATCTTCCATTTGAAGAGAGACAGGCATCCCTTGCAGATTATGGTTTCAGATGTAGGTGCCCAAAGTGCATTGAAGAACAACCATAG 1359 0.4091 MESICPIDSRCANEIAALLSPPSPLQVQEYYHKLLSARKCSSIIVQQDENFGKGVYAAIDFNDAELVLKDQMLVGVQHSSNKIDCFVCSSCFCFLGSIELQIGRRLYMQEVGASESHNCDMSDSSNASKYNNDTYSSDGEESSYKKREDGAGECSFSSPEAKVHVPEGVVQSLMNGHMMLPYSNKFSLPPAVPCPGGCGESFYCSTSCAEADWKSCHSLICTGEKSDTARREALLKFIKHANETNDIFLLAAKAISSTIVRWWDCVALPDDINSYDEVAFRMQIRDLAFESLQLLKKAIFDRECEPLFSLEIYGHIIGMFEQNNLDLVVASPVEDYFLYIDNLTYPEKEKAEEITQPILDALGEDYSICCQGTAFFPLQSCMNHSCCPNAKAFKREEDRDGQATIIALTSIRKGEEITISYVDEDLPFEERQASLADYGFRCRCPKCIEEQP 452
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci7g2241 452 Pfam SET domain 355 421 IPR001214 GO:0005515
Prci7g2241 452 MobiDBLite consensus disorder prediction 116 159 - -
Prci7g2241 452 Pfam MYND finger 193 221 IPR002893 -
Prci7g2241 452 Gene3D - 173 223 - -
Prci7g2241 452 PANTHER HISTONE-LYSINE N-METHYLTRANSFERASE ATXR2 261 451 IPR044237 GO:0008168
Prci7g2241 452 CDD SET_SMYD 361 447 - -
Prci7g2241 452 Gene3D SET domain 343 451 IPR046341 -
Prci7g2241 452 SUPERFAMILY HIT/MYND zinc finger-like 193 222 - -
Prci7g2241 452 ProSiteProfiles SET domain profile. 41 422 IPR001214 GO:0005515
Prci7g2241 452 MobiDBLite consensus disorder prediction 139 153 - -
Prci7g2241 452 MobiDBLite consensus disorder prediction 116 138 - -
Prci7g2241 452 SUPERFAMILY SET domain 38 447 IPR046341 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci7g2241 Prci-Chr7 35798876 35822889 Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SET Prci7g2241 SET 1.7e-10 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci7g2241 - - pcin:129300428 895.575