Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci7g2240 ATGGAGTCCATTTGCCCAATAGACTCGCGGTGTGCCAATGAAATTGCAGCTCTTCTCAGTCCTCCGTCACCTCTTCAAGTCCAGGAATATTATCACAAGCTTTTATCTGCGAGGAAGTGCAGTAGTATCATAGTCCAACAGGATGAAAATTTTGGAAAGGGTGTGTATGCTGCCATAGACTTCAATGACGCAGAGCTTGTTCTGAAAGATCAAATGCTAGTTGGGGTTCAACACTCTTCCAACAAGATTGATTGTTTTGTCTGTAGTTCCTGCTTTTGTTTTCTTGGTTCTATAGAACTTCAAATCGGAAGGAGGCTTTACATGCAAGAAGTAGGGGCATCTGAGAGTCATAATTGTGATATGAGTGACTCTTCAAACGCATCAAAATACAATAATGACACATATTCATCTGATGGAGAAGAAAGTTCATATAAAAAAAGGGAGGATGGCGCTGGTGAATGTAGTTTTAGTAGTCCTGAAGCTAAAGTTCATGTCCCTGAAGGAGTTGTTCAATCATTAATGAACGGCCACATGATGCTTCCTTACTCCAACAAGTTCTCCTTGCCACCAGCTGTTCCATGCCCTGGTGGATGTGGAGAGTCATTCTACTGCAGCACATCATGTGCAGAGGCTGATTGGAAATCCTGTCATTCTTTGATTTGTACTGGTGAGAAGTCTGATACAGCACGTAGGGAGGCACTTCTAAAATTCATCAAACATGCTAATGAAACAAACGATATATTCCTCCTTGCTGCAAAGGCTATTTCTTCCACCATTGTAAGGTACCACAAGTTAAAAGAAAGCTGTCTTTTAGAGCAAGGAAAACATGATACGTCACATCTTTCAAACCATTGTGATCTCACTTTTCTTTTGGAGTCTTGGAGACCTATAGCAATGGGACACAAGAGAAGGTGGTGGGACTGCGTTGCATTGCCAGATGATATTAATTCTTATGATGAAGTTGCATTCAGGATGCAAATAAGAGATCTGGCATTTGAGTCACTCCAACTTCTAAAGAAAGCTATATTTGACAGAGAGTGTGAACCATTATTCTCCCTGGAAATATATGGGCACATCATTGGCATGTTTGAGCAAAACAATCTTGATTTGGTAGTAGCTTCTCCTGTGGAGGATTACTTTTTGTACATTGACAATCTAACATATCCTGAAAAGGAAAAAGCTGAGGAAATTACACAACCAATTCTGGATGCTCTTGGTGAAGACTATTCAATTTGTTGCCAGGGAACTGCTTTTTTTCCTTTGCAAAGCTGCATGAACCATTCTTGTTGTCCTAATGCCAAGGCATTCAAAAGAGAGGAGGATAGAGATGGTCAAGCAACAATAATTGCATTGACGTCAATTCGTAAAGGAGAAGAGATAACCATCTCATATGTCGATGAGGATCTTCCATTTGAAGAGAGACAGGCATCCCTTGCAGATTATGGTTTCAGATGTAGGTGCCCAAAGTGCATTGAAGAACAACCATAG 1488 0.4073 MESICPIDSRCANEIAALLSPPSPLQVQEYYHKLLSARKCSSIIVQQDENFGKGVYAAIDFNDAELVLKDQMLVGVQHSSNKIDCFVCSSCFCFLGSIELQIGRRLYMQEVGASESHNCDMSDSSNASKYNNDTYSSDGEESSYKKREDGAGECSFSSPEAKVHVPEGVVQSLMNGHMMLPYSNKFSLPPAVPCPGGCGESFYCSTSCAEADWKSCHSLICTGEKSDTARREALLKFIKHANETNDIFLLAAKAISSTIVRYHKLKESCLLEQGKHDTSHLSNHCDLTFLLESWRPIAMGHKRRWWDCVALPDDINSYDEVAFRMQIRDLAFESLQLLKKAIFDRECEPLFSLEIYGHIIGMFEQNNLDLVVASPVEDYFLYIDNLTYPEKEKAEEITQPILDALGEDYSICCQGTAFFPLQSCMNHSCCPNAKAFKREEDRDGQATIIALTSIRKGEEITISYVDEDLPFEERQASLADYGFRCRCPKCIEEQP 495
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci7g2240 495 SUPERFAMILY SET domain 43 488 IPR046341 -
Prci7g2240 495 SUPERFAMILY HIT/MYND zinc finger-like 193 222 - -
Prci7g2240 495 Gene3D SET domain 386 494 IPR046341 -
Prci7g2240 495 PANTHER HISTONE-LYSINE N-METHYLTRANSFERASE ATXR2 13 494 IPR044237 GO:0008168
Prci7g2240 495 Pfam SET domain 398 464 IPR001214 GO:0005515
Prci7g2240 495 MobiDBLite consensus disorder prediction 139 153 - -
Prci7g2240 495 MobiDBLite consensus disorder prediction 116 159 - -
Prci7g2240 495 MobiDBLite consensus disorder prediction 116 138 - -
Prci7g2240 495 ProSiteProfiles SET domain profile. 41 465 IPR001214 GO:0005515
Prci7g2240 495 CDD SET_SMYD 404 490 - -
Prci7g2240 495 Gene3D - 174 223 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci7g2240 Prci-Chr7 35798876 35822889 Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SET Prci7g2240 SET 1.6e-10 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci7g2240 - - pcin:129300428 1009.21
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Prci7g2240 7 35798876 35822889 Prci7g2240 7 35798876 35822889 ECH