Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci7g2233 ATGGATTCTCTATGCGAGTTATGTGTAGTGGTAAGAGCTGTGGTGTATTGCAAGCGTGATTCTGCGCGTCTCTGTTTGAATTGTGATGCTTATGTTCACTCTGCCAACGCTTTGTCGCGCAGACATCCTCGCTCGCTGGTATGTGACAAATGCCAAGCCCAACCAGCGATTGTCCACTGCGTGGATGATAAAATGTCTCTGTGTCAAGGTTGTGATTGTAATCGAAATGTCTGTCTGGGATTAGGACACAGGCGTCTGATGTTGCTTAGTTACACAGGTTGTCCGTCTTTCGCTGAGATGTGTAGGATCTGGCCCTTTGCTTTTGACTCTACCTCGAGCGGTTTACCTCGTAGTTGGGGATCTTTTAATTCCTTGCCAAAGAATGAAAGCATCTGTTTCGCGCAGCTAGATGACAATGATGCATCCGTCGGTGGCAAGTTGAGTGAACTTGAATCTTGCACAAAGTATGACCCTAAGATGCCTCAATCCTCAATCCTTCAACCAAATCCAAATTTCATGCCCTATTGCAGAGATCAACCAGTTTTATTTCCTCAAGACTCTAAACTCCTGCCAAAGATGCAGGGATTTCACGATTCCAAGGACATTGGAATTTCCGAGGCTGACGACCTCTGTGAAGCTCTTAACATGGACAGTGTTCAATTGAACTTTGAAAGTGCTAATGAAATGTTTGATTGCTCCCAAGGCGCCACTGGTTACCAGCTGGAGGATGGAGGATTGGATTGTCTATTAATCGAAAAAAACTTATCAGTTACAGAATCTAATGGCCTTATTCAGAATACCATGGAGGCATCATCATCAGTCCAGCAAGGTTGCGTGGGTTTTCAATCATCCAGGGAAGGTGGATCAGGTTCTATGATCCAGGGGATGAACAGAAATGCAAATTGTGTACTTATGAATCCTAGCTGCAACGGAGAAATGAATATGGGATTTCCTCAGGGTCAAGTTCATTCAAGTATGCCGCTATCATTGCCCACCATCAATTGTGATAGTGACACTACCACTACGGATTTTCAGGATTGTGCCACTTCTGAGTTTCAAGATTGTGGGTTATCACCAACACTATTGACAGTTGATACACCATGGGAATCAAATTTGGGGTCTACATGCCCACAAGCAAGGGAGAAAGCTAAAATGAGATACATTGAGAAAAAGAAGACTCGAACGTTTAGTAAACAAATAAGGTACGCGTCTCGCAAAGCAAGAGCTGATACTAGAAAACGTGTAAAAGGTAGATTTGTGAAAGCAGGAGAAGAATATGATTATGATCCTCTTGTGACAGAGAACTACTAA 1311 0.434 MDSLCELCVVVRAVVYCKRDSARLCLNCDAYVHSANALSRRHPRSLVCDKCQAQPAIVHCVDDKMSLCQGCDCNRNVCLGLGHRRLMLLSYTGCPSFAEMCRIWPFAFDSTSSGLPRSWGSFNSLPKNESICFAQLDDNDASVGGKLSELESCTKYDPKMPQSSILQPNPNFMPYCRDQPVLFPQDSKLLPKMQGFHDSKDIGISEADDLCEALNMDSVQLNFESANEMFDCSQGATGYQLEDGGLDCLLIEKNLSVTESNGLIQNTMEASSSVQQGCVGFQSSREGGSGSMIQGMNRNANCVLMNPSCNGEMNMGFPQGQVHSSMPLSLPTINCDSDTTTTDFQDCATSEFQDCGLSPTLLTVDTPWESNLGSTCPQAREKAKMRYIEKKKTRTFSKQIRYASRKARADTRKRVKGRFVKAGEEYDYDPLVTENY 436
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci7g2233 436 PANTHER ZINC FINGER PROTEIN CONSTANS-LIKE 10 4 425 - -
Prci7g2233 436 ProSiteProfiles Zinc finger B-box type profile. 43 88 IPR000315 GO:0008270
Prci7g2233 436 Pfam CCT motif 380 422 IPR010402 GO:0005515
Prci7g2233 436 SMART bboxneu5 48 88 IPR000315 GO:0008270
Prci7g2233 436 SMART bboxneu5 1 47 IPR000315 GO:0008270
Prci7g2233 436 CDD Bbox1_BBX-like 4 47 - -
Prci7g2233 436 ProSiteProfiles CCT domain profile. 380 422 IPR010402 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci7g2233 Prci-Chr7 35785057 35787425 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci7g2233 1 430 C2C2-CO-like Transcription Factor Family AT3G21880 37.327 9.23e-82 254
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Prci7g2233 CCT 2.2e-16 CL0281
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci7g2233 - - gmx:100804738 535.413