Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci7g2232 ATGGATTCTCTATGCGAGTTATGTGTAGTGGTAAGAGCTGTGGTGTATTGCAAGCGTGATTCTGCGCGTCTCTGTTTGAATTGTGATGCTTATGTTCACTCTGCCAACGCTTTGTCGCGCAGACATCCTCGCTCGCTGGTATGTGACAAATGCCAAGCCCAACCAGCGATTGTCCACTGCGTGGATGATAAAATGTCTCTGTGTCAAGGTTGTGATTGTAATCGAAATGTCTGTCTGGGATTAGGACACAGGCGTCTGATGTTGCTTAGTTACACAGGTTGTCCGTCTTTCGCTGAGATGTGTAGGATCTGGCCCTTTGCTTTTGACTCTACCTCGAGCGGTTTACCTCGTAGTTGGGGATCTTTTAATTCCTTGCCAAAGAATGAAAGCATCTGTTTCGCGCAGCTAGATGACAATGATGCATCCGTCGGTGGCAAGTTGAGTGAACTTGAATCTTGCACAAAGTATGACCCTAAGATGCCTCAATCCTCAATCCTTCAACCAAATCCAAATTTCATGCCCTATTGCAGAGATCAACCAGTTTTATTTCCTCAAGACTCTAAACTCCTGCCAAAGGGATTTCACGATTCCAAGGACATTGGAATTTCCGAGGCTGACGACCTCTGTGAAGCTCTTAACATGGACAGTGTTCAATTGAACTTTGAAAGTGCTAATGAAATGTTTGATTGCTCCCAAGGCGCCACTGGTTACCAGCTGGAGGATGGAGGATTGGATTGTCTATTAATCGAAAAAAACTTATCAGTTACAGAATCTAATGGCCTTATTCAGAATACCATGGAGGCATCATCATCAGTCCAGCAAGGTTGCGTGGGTTTTCAATCATCCAGGGAAGGTGGATCAGGTTCTATGATCCAGGGGATGAACAGAAATGCAAATTGTGTACTTATGAATCCTAGCTGCAACGGAGAAATGAATATGGGATTTCCTCAGGGTCAAGTTCATTCAAGTATGCCGCTATCATTGCCCACCATCAATTGTGATAGTGACACTACCACTACGGATTTTCAGGATTGTGCCACTTCTGAGTTTCAAGATTGTGGGTTATCACCAACACTATTGACAGTTGATACACCATGGGAATCAAATTTGGGGTCTACATGCCCACAAGCAAGGGAGAAAGCTAAAATGAGATACATTGAGAAAAAGAAGACTCGAACGTTTAGTAAACAAATAAGGTACGCGTCTCGCAAAGCAAGAGCTGATACTAGAAAACGTGTAAAAGGTAGATTTGTGAAAGCAGGAGAAGAATATGATTATGATCCTCTTGTGACAGAGAACTACTAA 1305 0.4337 MDSLCELCVVVRAVVYCKRDSARLCLNCDAYVHSANALSRRHPRSLVCDKCQAQPAIVHCVDDKMSLCQGCDCNRNVCLGLGHRRLMLLSYTGCPSFAEMCRIWPFAFDSTSSGLPRSWGSFNSLPKNESICFAQLDDNDASVGGKLSELESCTKYDPKMPQSSILQPNPNFMPYCRDQPVLFPQDSKLLPKGFHDSKDIGISEADDLCEALNMDSVQLNFESANEMFDCSQGATGYQLEDGGLDCLLIEKNLSVTESNGLIQNTMEASSSVQQGCVGFQSSREGGSGSMIQGMNRNANCVLMNPSCNGEMNMGFPQGQVHSSMPLSLPTINCDSDTTTTDFQDCATSEFQDCGLSPTLLTVDTPWESNLGSTCPQAREKAKMRYIEKKKTRTFSKQIRYASRKARADTRKRVKGRFVKAGEEYDYDPLVTENY 434
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci7g2232 434 ProSiteProfiles CCT domain profile. 378 420 IPR010402 GO:0005515
Prci7g2232 434 PANTHER ZINC FINGER PROTEIN CONSTANS-LIKE 10 4 423 - -
Prci7g2232 434 ProSiteProfiles Zinc finger B-box type profile. 43 88 IPR000315 GO:0008270
Prci7g2232 434 SMART bboxneu5 48 88 IPR000315 GO:0008270
Prci7g2232 434 SMART bboxneu5 1 47 IPR000315 GO:0008270
Prci7g2232 434 CDD Bbox1_BBX-like 4 47 - -
Prci7g2232 434 Pfam CCT motif 378 420 IPR010402 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci7g2232 Prci-Chr7 35785057 35787425 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci7g2232 1 428 C2C2-CO-like Transcription Factor Family AT3G21880 37.269 4.75e-81 253
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Prci7g2232 CCT 2.2e-16 CL0281
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci7g2232 - - gmx:100804738 533.487
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Prci7g2232 7 35785057 35787425 Prci7g2232 7 35785057 35787425 ECH