Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci7g2216 ATGTTCTCCGGCGTCAGCCTTCAGTCCATTCTCAGCCTCAACCCCTCCGTCTTCTCTGACTACGCCGCCAGCAATGGCCTCCCTGGTCTCGCCTTCCTACCGGATGATTCCCTGTCTCTGAATCTTCCAGGCACAGTCACCCAGGACTTCAACACTGAACACCACATTCCAGAGACAAGGGAGCCTACTATCATTCCCAAGTCTGAGCCCGGTCTCTTCGAATACGTTGCTCTCTCCGGGACCACTACTCACCCCTTCGACTTCTTCTCCAGTCACTGCCCTCCCAGCTTCTACGATTCATCAACCTCCATCCTGCTCCCTCAGCTCCATTCCGTCGAGTCCTTTTCTCACAAACGTCCCCGCTTCGACTCCCTCATTTCTACTCCCAACACCGTGCCGCCGCCGGCGCAACACCACCCCGACCCTGCCACCGTAGGAAATAACCTCTTGGCCGTCGCGCCTTCGCTTAACACCCAACCTTCCTCTTCTTCGTTGGATGGCCCCGCCGGTGAAAAATCCTCTCCGGTGATCCCTCAAAGCAACCTGGCACGTCAGCGGCGGCAGAAGCTGAGCGACAAGACTCGGTGCTTGCAGAAATTGATGCCGTGGGACAAGAAGATGGACCAAGCCACGCTCCTGGAGGAGGCGTACAAGTACGTCAAATTTCTGCAGGCTCAGTTCAATGCCCTCCAATGCATGCCCCCCGATTCGCCCTTCCTGTCCCTCCGTGGCGCTTCGCATTCCCAATCCTCCCTTCTAAACGGTGACGTTTTTGGGGATTTAGAGAGGTTGAATCGAAACCAGGTGTTGCAGGTGCTGGTGAACTCGCCCGTTGCTCAAACAAGGCTTTACTCCCAAGGCTTCTGCGTGCTGTCCGTGGAACAGTTAACTTTGCTGAGCAGCATGGCAGGGAGGAGGCTTCTTCTGCCGCAGATGATGTCCGATAACGCTTCGTCAAAATCCTTCTTTAAGTGA 975 0.5569 MFSGVSLQSILSLNPSVFSDYAASNGLPGLAFLPDDSLSLNLPGTVTQDFNTEHHIPETREPTIIPKSEPGLFEYVALSGTTTHPFDFFSSHCPPSFYDSSTSILLPQLHSVESFSHKRPRFDSLISTPNTVPPPAQHHPDPATVGNNLLAVAPSLNTQPSSSSLDGPAGEKSSPVIPQSNLARQRRQKLSDKTRCLQKLMPWDKKMDQATLLEEAYKYVKFLQAQFNALQCMPPDSPFLSLRGASHSQSSLLNGDVFGDLERLNRNQVLQVLVNSPVAQTRLYSQGFCVLSVEQLTLLSSMAGRRLLLPQMMSDNASSKSFFK 324
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci7g2216 324 MobiDBLite consensus disorder prediction 150 185 - -
Prci7g2216 324 PANTHER TRANSCRIPTION FACTOR HEC3-RELATED 130 298 IPR045843 GO:0003700|GO:0006355
Prci7g2216 324 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 176 231 IPR036638 GO:0046983
Prci7g2216 324 MobiDBLite consensus disorder prediction 125 191 - -
Prci7g2216 324 Gene3D - 178 233 IPR036638 GO:0046983
Prci7g2216 324 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 174 223 IPR011598 GO:0046983
Prci7g2216 324 Pfam Helix-loop-helix DNA-binding domain 184 224 IPR011598 GO:0046983
Prci7g2216 324 SMART finulus 180 229 IPR011598 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci7g2216 Prci-Chr7 35729606 35731244 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci7g2216 186 303 Basic Helix-Loop-Helix Transcription Factor Gene Family AT3G22100 44.068 3.66e-25 100
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Prci7g2216 HLH 0.00026 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci7g2216 - - pcin:129314920 649.047