Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci7g2199 ATGCAGAAATTACAGAAAGGCCATAATAAAAGGGAGGGATCTAAGTCCGTGGCGGAGACGCTGGCTAAATGGAAAGAATATAATGCCCGGCTTGACTCTTGCAGTGATGCAGACAAGCCAATTCGGAAAGTTCCTGCCAAAGGATCCAAGAAGGGATGCATGAAAGGCAAAGGAGGGCCTGAGAACTCTCGTTGTAACTACAGGGGCGTAAGGCAGAGGACATGGAGCAAGTGGGTTGCTGAGATTCGAGAGCCAAACAGAGGAAGTAGGCTCTGGTTGGGTACATTTCCTACTGCCATTGGAGCTGCTCTTGCCTACGATGATGCAGCAAGAGCAATGTATGGCTCTTTTGCTCGCCTCAACTTTCCCAATGTTTCAGTTTCCAATTTTTCAAATGAAGTTGCAAATCAATCTGATTCTGCAGTGCCCACTGAGTCTGTGATGTCCCCAACGAACTCTGGCTCAGATGAGTTAGATGATACCGACAAAAAACCTGATCCCTTGAATGTAAAAGTTGAGGAAGGGGAAGTTGAATTGAGGATCAATTCCTCCACGCTTTCATGA 564 0.4663 MQKLQKGHNKREGSKSVAETLAKWKEYNARLDSCSDADKPIRKVPAKGSKKGCMKGKGGPENSRCNYRGVRQRTWSKWVAEIREPNRGSRLWLGTFPTAIGAALAYDDAARAMYGSFARLNFPNVSVSNFSNEVANQSDSAVPTESVMSPTNSGSDELDDTDKKPDPLNVKVEEGEVELRINSSTLS 187
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci7g2199 187 CDD AP2 65 125 IPR001471 GO:0003700|GO:0006355
Prci7g2199 187 PANTHER DEHYDRATION-RESPONSIVE ELEMENT-BINDING PROTEIN 2C 2 153 - -
Prci7g2199 187 Pfam AP2 domain 65 115 IPR001471 GO:0003700|GO:0006355
Prci7g2199 187 SMART rav1_2 66 129 IPR001471 GO:0003700|GO:0006355
Prci7g2199 187 ProSiteProfiles AP2/ERF domain profile. 66 123 IPR001471 GO:0003700|GO:0006355
Prci7g2199 187 PRINTS Ethylene responsive element binding protein signature 67 78 IPR001471 GO:0003700|GO:0006355
Prci7g2199 187 PRINTS Ethylene responsive element binding protein signature 89 105 IPR001471 GO:0003700|GO:0006355
Prci7g2199 187 MobiDBLite consensus disorder prediction 38 61 - -
Prci7g2199 187 MobiDBLite consensus disorder prediction 136 187 - -
Prci7g2199 187 MobiDBLite consensus disorder prediction 136 155 - -
Prci7g2199 187 MobiDBLite consensus disorder prediction 156 178 - -
Prci7g2199 187 Gene3D AP2/ERF domain 66 125 IPR036955 GO:0003700|GO:0006355
Prci7g2199 187 SUPERFAMILY DNA-binding domain 66 123 IPR016177 GO:0003677
Prci7g2199 187 FunFam Ethylene-responsive transcription factor 2 65 124 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci7g2199 Prci-Chr7 35658054 35659631 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci7g2199 10 157 AP2-EREBP Transcription Factor Family AT2G40340 55.263 5.49e-51 166
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Prci7g2199 AP2 4.4e-13 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci7g2199 - - gmx:100499747 238.424