Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci7g2192 ATGAAGAATTGTGAGCTGTGCAAGGTCCCGGCGAGGACCTACTGCGAGTCCGACCAGGCTAGCCTGTGCTGGGACTGCGACGCTAAGGTCCACGGAGCTAACTTCTTGGTAACCAGGCACTCCAGGACTCTTCTCTGCCATGTGTGTCAGTCCCTGACTCCATGGAAAGCCTCCGGTGCTAGGCTCGGAAACACTTTTTCTCTTTGCGAGAGTTGTGCCAGCGGAATGAAGGATAACGGTGAAGAAGGGGAAGAGAGCGAAGGTGGCAATGACGACGACATAGACACAGAGGAGGATCTCGACGACGACGGAGACGACAACGGCGGCGATGAGGATGGAGATAATCAGGTAGTTCCCTTGTCCTCCATGCCGCCTCCGCCGGCTTCAAACTCCTCGAGTAGCGAAGAGTCAAACAGCAGATGTAATAGCAGCAATATAGTTATTTCTGAAACGGCGAGTACAATATCGTTGAAGCGAAAGCGTGAGGATGCACCGGATCTTGATTTTCAGGATGGTTGCAATTGGTGGTGTAATAAAGATCGGAAAGGTGGGGAGCTGAGAAAGCGGGTGGCATGGTTAGAATGTGAAGGCGGTGAAGGAACGTCGAAGGAATCGCCGAGAGGTAGAGAGATCGCGCCGGCGACCTTGAAGGGATCTAGCGATGCCAAAACGCCGGAAGCCGTTTGA 687 0.5342 MKNCELCKVPARTYCESDQASLCWDCDAKVHGANFLVTRHSRTLLCHVCQSLTPWKASGARLGNTFSLCESCASGMKDNGEEGEESEGGNDDDIDTEEDLDDDGDDNGGDEDGDNQVVPLSSMPPPPASNSSSSEESNSRCNSSNIVISETASTISLKRKREDAPDLDFQDGCNWWCNKDRKGGELRKRVAWLECEGGEGTSKESPRGREIAPATLKGSSDAKTPEAV 228
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci7g2192 228 MobiDBLite consensus disorder prediction 77 146 - -
Prci7g2192 228 MobiDBLite consensus disorder prediction 84 112 - -
Prci7g2192 228 CDD Bbox1_BBX-like 4 45 - -
Prci7g2192 228 PANTHER ZINC FINGER PROTEIN CONSTANS-LIKE 10 3 184 - -
Prci7g2192 228 MobiDBLite consensus disorder prediction 127 146 - -
Prci7g2192 228 SMART bboxneu5 1 45 IPR000315 GO:0008270
Prci7g2192 228 Pfam B-box zinc finger 2 42 IPR000315 GO:0008270
Prci7g2192 228 ProSiteProfiles Zinc finger B-box type profile. 1 45 IPR000315 GO:0008270
Prci7g2192 228 MobiDBLite consensus disorder prediction 197 228 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci7g2192 Prci-Chr7 35630447 35631624 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci7g2192 2 110 C2C2-CO-like Transcription Factor Family AT4G27310 55.856 1.10e-36 127
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Prci7g2192 zf-B_box 2.3e-06 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci7g2192 - - qsa:O6P43_028736 184.111
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Prci7g2192 7 35630447 35631624 Prci6g0793 6 5352993 5354082 CCT
Prci7g2192 7 35630447 35631624 Prci7g2192 7 35630447 35631624 ECH