Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci7g2184 ATGGTGAGAACTCCAAGCTGTGACAAAAGTGGACTGAAGAAAGGAACCTGGACGCCAGAGGAAGACAGGAAGCTAATGGCTTATGTTACTAGGTACGGCTGCTGGAATTGGCGCCAACTTCCCAAGTATGCAGGCTTAGCAAGGTGCGGAAAGAGCTGCAGACTGCGATGGCTAAATTACCTGAGGCCCAACATCAAGAGAGGCGATTTCACTCCAGAAGAAGAACAACTAATCATCCAACTGCACCACAAGCTCGGAAACAGATGGTCGGCCATTGCAGCCAAGCTTCCAGGAAGGACAGACAACGACATAAAGAACTACTGGCACACGAGCCTCAAGAAACGGGTGAAAAATAAGTCCGGAACACAGGAAAGGTTGTCGCAGCAGAAAGAATCCCAAGTGGAAGAGGAGGAGTCAGGGGAAATGGCAGTTAACGGTGGCGGTGCTGTTGAAAATCAGATGATGTCGGGGGATTCAGGTCCGGTGTGCCCCCAGTCACCATCGAGCATAACTGCAGAGGCCCCAGCAGCAGGCAGCAATGAATCAAGTTTGATGGTGGAAGATGAGTTTGCTTTTCTGAATGCAATCACAGATGCAAATTTCTGGACAGACCCGTATTATGTGGCTGACATTTTCTGTGACCCTACAGATATAGGATCATCCCCACCCCTGCTAACTCAACCCGATTACTCCTTTGCTACAGATCCATTGTGCGATCCACTGCTTCGGACTCACCATGATGCTTACCACGGCCAATATCCTGGCTTTTTCTCGTGA 777 0.4968 MVRTPSCDKSGLKKGTWTPEEDRKLMAYVTRYGCWNWRQLPKYAGLARCGKSCRLRWLNYLRPNIKRGDFTPEEEQLIIQLHHKLGNRWSAIAAKLPGRTDNDIKNYWHTSLKKRVKNKSGTQERLSQQKESQVEEEESGEMAVNGGGAVENQMMSGDSGPVCPQSPSSITAEAPAAGSNESSLMVEDEFAFLNAITDANFWTDPYYVADIFCDPTDIGSSPPLLTQPDYSFATDPLCDPLLRTHHDAYHGQYPGFFS 258
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci7g2184 258 ProSiteProfiles Myb-like domain profile. 9 61 IPR001005 -
Prci7g2184 258 Gene3D - 69 142 - -
Prci7g2184 258 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 9 61 IPR017930 -
Prci7g2184 258 CDD SANT 16 61 IPR001005 -
Prci7g2184 258 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 62 116 IPR017930 -
Prci7g2184 258 MobiDBLite consensus disorder prediction 115 176 - -
Prci7g2184 258 PANTHER MYB FAMILY TRANSCRIPTION FACTOR 1 161 - -
Prci7g2184 258 CDD SANT 70 112 IPR001005 -
Prci7g2184 258 Pfam Myb-like DNA-binding domain 67 110 IPR001005 -
Prci7g2184 258 Pfam Myb-like DNA-binding domain 14 61 IPR001005 -
Prci7g2184 258 SMART sant 13 63 IPR001005 -
Prci7g2184 258 SMART sant 66 114 IPR001005 -
Prci7g2184 258 Gene3D - 13 66 - -
Prci7g2184 258 ProSiteProfiles Myb-like domain profile. 62 112 IPR001005 -
Prci7g2184 258 MobiDBLite consensus disorder prediction 158 176 - -
Prci7g2184 258 SUPERFAMILY Homeodomain-like 11 108 IPR009057 -
Prci7g2184 258 FunFam Transcription factor RAX3 7 67 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci7g2184 Prci-Chr7 35541638 35543040 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci7g2184 1 208 MYB Transcription Factor Family AT2G31180 48.325 5.78e-62 193
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Prci7g2184 Myb_DNA-binding 3e-13 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci7g2184 K09422 - pop:7497409 251.521