Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci7g2183 ATGTTACTAGGTATGGCTGCTGGAATTGGCGCCAACTCCCCAGGTTTGCAGGTAATTGGTCTTCACTTAATTATTTCATGCCCCATCATGAGACTGTTTCCGGAATTAAACGGCCTCTGTACAATCTGGGTTTCAGGGCTGGCGAGGTGTGGAAAGAGTTGTAGGCTGAGGTGGATGAATTATTTGAGACCCAACATCAAGAGAGGCAACTACACTCCTCAAGAAGAGGAGCTTATCATTCAATTGCACAAAGAGCTGGGCAACAGATGGTCGGCGATCGCAGCTCAGTTGCCCGGGAGAACTGATAACGAAATAAAGAACCACTGGCACACCACCCTCAAGAAGCGATTGCAACACAGCTCGAGTGAACACCATCAATCTAGAAAGTCAAAGGATACTTCCACTTCCAAACCACACGGCGGTTCTTCTCCTCCAGAATCTGCTTCTTCCCGGATCGAAATCCTGGATTCTAGCCCATTGTCTCCCCTGTCGTCATCAACCTCCTCTGCTAATACAGCTTCCTCTTCTCTGGAAGACGACTTGGCTTTTCTCGACGCTCTTCCAGAGCCTGAGTCCCAAAATTCATGGACCCACCTAAATTTGGATGACATCTTTTGCGATCCAGCTGAATCAATGCCGATGCACGCTACTTCTCCAACTTCATCGATTCCTCACGCTGAGGATTTGGAGGATGATTTTGCTTTCTTCCTGGATTCTCTTTCCCAGGCACCATTTGAAAGTTTTCTGATAGACACACAGATGGCTGACGTGTCTTACCCCCAAATACAGTCACAAGCACCATTGGGCGCTGATCAATTAGGATATCTTTATCCACTTTACGATCTAGACCTCTGGAGTCAAAGTAATTTGTATGAATGA 879 0.4687 MLLGMAAGIGANSPGLQVIGLHLIISCPIMRLFPELNGLCTIWVSGLARCGKSCRLRWMNYLRPNIKRGNYTPQEEELIIQLHKELGNRWSAIAAQLPGRTDNEIKNHWHTTLKKRLQHSSSEHHQSRKSKDTSTSKPHGGSSPPESASSRIEILDSSPLSPLSSSTSSANTASSSLEDDLAFLDALPEPESQNSWTHLNLDDIFCDPAESMPMHATSPTSSIPHAEDLEDDFAFFLDSLSQAPFESFLIDTQMADVSYPQIQSQAPLGADQLGYLYPLYDLDLWSQSNLYE 292
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci7g2183 292 MobiDBLite consensus disorder prediction 136 150 - -
Prci7g2183 292 Gene3D - 29 67 - -
Prci7g2183 292 ProSiteProfiles Myb-like domain profile. 63 113 IPR001005 -
Prci7g2183 292 Pfam Myb-like DNA-binding domain 68 112 IPR001005 -
Prci7g2183 292 SMART sant 67 115 IPR001005 -
Prci7g2183 292 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 63 117 IPR017930 -
Prci7g2183 292 MobiDBLite consensus disorder prediction 115 150 - -
Prci7g2183 292 SUPERFAMILY Homeodomain-like 49 121 IPR009057 -
Prci7g2183 292 CDD SANT 70 113 IPR001005 -
Prci7g2183 292 MobiDBLite consensus disorder prediction 115 135 - -
Prci7g2183 292 PANTHER MYB DOMAIN PROTEIN 55 46 209 - -
Prci7g2183 292 Gene3D - 70 139 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci7g2183 Prci-Chr7 35512694 35513797 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci7g2183 28 258 MYB Transcription Factor Family AT1G06180 40.000 2.30e-42 144
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Prci7g2183 Myb_DNA-binding 2.4e-16 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci7g2183 K09422 - gmx:100777107 187.963