Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci7g2182 ATGGTGAGAACACCTTCGTATGACAAAAGCGGACTGAAAAAAGGAACCTGGACACCCGAGGAAGACAGGAAATTGATTGCTTATGTTACTAGGTATGGCTGCTGGAATTGGCGCCAACTCCCCAGGTTTGCAGGGCTGGCGAGGTGTGGAAAGAGTTGTAGGCTGAGGTGGATGAATTATTTGAGACCCAACATCAAGAGAGGCAACTACACTCCTCAAGAAGAGGAGCTTATCATTCAATTGCACAAAGAGCTGGGCAACAGATGGTCGGCGATCGCAGCTCAGTTGCCCGGGAGAACTGATAACGAAATAAAGAACCACTGGCACACCACCCTCAAGAAGCGATTGCAACACAGCTCGAGTGAACACCATCAATCTAGAAAGTCAAAGGATACTTCCACTTCCAAACCACACGGCGGTTCTTCTCCTCCAGAATCTGCTTCTTCCCGGATCGAAATCCTGGATTCTAGCCCATTGTCTCCCCTGTCGTCATCAACCTCCTCTGCTAATACAGCTTCCTCTTCTCTGGAAGACGACTTGGCTTTTCTCGACGCTCTTCCAGAGCCTGAGTCCCAAAATTCATGGACCCACCTAAATTTGGATGACATCTTTTGCGATCCAGCTGAATCAATGCCGATGCACGCTACTTCTCCAACTTCATCGATTCCTCACGCTGAGGATTTGGAGGATGATTTTGCTTTCTTCCTGGATTCTCTTTCCCAGGCACCATTTGAAAGTTTTCTGATAGACACACAGATGGCTGACGTGTCTTACCCCCAAATACAGTCACAAGCACCATTGGGCGCTGATCAATTAGGATATCTTTATCCACTTTACGATCTAGACCTCTGGAGTCAAAGTAATTTGTATGAATGA 876 0.4726 MVRTPSYDKSGLKKGTWTPEEDRKLIAYVTRYGCWNWRQLPRFAGLARCGKSCRLRWMNYLRPNIKRGNYTPQEEELIIQLHKELGNRWSAIAAQLPGRTDNEIKNHWHTTLKKRLQHSSSEHHQSRKSKDTSTSKPHGGSSPPESASSRIEILDSSPLSPLSSSTSSANTASSSLEDDLAFLDALPEPESQNSWTHLNLDDIFCDPAESMPMHATSPTSSIPHAEDLEDDFAFFLDSLSQAPFESFLIDTQMADVSYPQIQSQAPLGADQLGYLYPLYDLDLWSQSNLYE 291
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci7g2182 291 CDD SANT 69 112 IPR001005 -
Prci7g2182 291 FunFam MYB-related transcription factor 13 66 - -
Prci7g2182 291 PANTHER MYB FAMILY TRANSCRIPTION FACTOR 1 178 - -
Prci7g2182 291 ProSiteProfiles Myb-like domain profile. 62 112 IPR001005 -
Prci7g2182 291 CDD SANT 16 61 IPR001005 -
Prci7g2182 291 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 9 61 IPR017930 -
Prci7g2182 291 Gene3D - 68 138 - -
Prci7g2182 291 Gene3D - 6 67 - -
Prci7g2182 291 ProSiteProfiles Myb-like domain profile. 9 61 IPR001005 -
Prci7g2182 291 SMART sant 66 114 IPR001005 -
Prci7g2182 291 SMART sant 13 63 IPR001005 -
Prci7g2182 291 Pfam Myb-like DNA-binding domain 67 111 IPR001005 -
Prci7g2182 291 Pfam Myb-like DNA-binding domain 14 61 IPR001005 -
Prci7g2182 291 MobiDBLite consensus disorder prediction 114 149 - -
Prci7g2182 291 MobiDBLite consensus disorder prediction 114 134 - -
Prci7g2182 291 SUPERFAMILY Homeodomain-like 11 108 IPR009057 -
Prci7g2182 291 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 62 116 IPR017930 -
Prci7g2182 291 MobiDBLite consensus disorder prediction 135 149 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci7g2182 Prci-Chr7 35512694 35513968 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci7g2182 1 184 MYB Transcription Factor Family AT2G31180 51.087 4.76e-61 192
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Prci7g2182 Myb_DNA-binding 1.8e-12 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci7g2182 K09422 - gmx:100777107 275.404