Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci7g2180 ATGGAGTTTGACCTCGAAAACCCCTTCCAACACTCTCACTCCGTTTCTTCCCTCTTCCTGGCTGAACCTGACCACATCCCTTCCCGCCACTACTTCCTCACTCTCCACTCCGCTCACTTTCACCTCTCTCTGCGAACCCGTCTCATCTCTCTCATCTCTCAGCTGCCCTGTACCTTCGATCCCCTCCTCTCCTACCTGGCTATCAACTATCTGGATCGCTTTCTCGCCTCCCAAGTCACACTGGAGCAAAAGCCATGGACCCTCAAGCTCCTTGCAGTATCATGCTTATCTCTAGCTGCCAAGATGATAAAAACAGAGTTTTCCGTCACCGATGTCCAGGCCTTTCTGAAGCAGGGTGACGGCGGTATCATCTTTGAAACACAAACAGTACAGAGAATGGAAGCTTTGATCTTGGGAGCTCTCCAATGGCGAATGCGTTCCATCACCCCCTTCTCTTTCATTCCTTTCTTCATCACCTTGTTCATGCTCAAAGACCCGCCGTTGAGGCAAGTTCTGAAGGATCGAGCCGCCCAAATTATATTTAAATCACAGAGAGAGATAAAGCTTTTGGAATTCAAGCCTTCCATAATTGCTGCATCGGCCCTCTTGTATGCTTCTCATGAGCTGTTTCCCTTTCAATATCCGTGCTTTCTCTCGGCAATTTCAGACTGCCCACACGTAAATAAAGAAACCATGTTGCAGTGTTACAACGTGATACGAGACATTGCAATGGAGGGGTACGAGTCTGTGTTGGACATGGTTTCCAGTTCAGACACTCCGGTTAATGTATTGGACCATCATTTTCTGAGCTCAGAAAGCGAAAGAACCGACGGAAATCCCGCTGCTGCCACGACCCTTAGACAAGAGAAAGATCTCAAGAGAAGGAAAATTAACGATTGCGGTGACAATCTTACGGCTCACATCTCTCAGGCTTAA 936 0.4808 MEFDLENPFQHSHSVSSLFLAEPDHIPSRHYFLTLHSAHFHLSLRTRLISLISQLPCTFDPLLSYLAINYLDRFLASQVTLEQKPWTLKLLAVSCLSLAAKMIKTEFSVTDVQAFLKQGDGGIIFETQTVQRMEALILGALQWRMRSITPFSFIPFFITLFMLKDPPLRQVLKDRAAQIIFKSQREIKLLEFKPSIIAASALLYASHELFPFQYPCFLSAISDCPHVNKETMLQCYNVIRDIAMEGYESVLDMVSSSDTPVNVLDHHFLSSESERTDGNPAAATTLRQEKDLKRRKINDCGDNLTAHISQA 311
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci7g2180 311 PANTHER CYCLINS 42 241 IPR039361 -
Prci7g2180 311 SUPERFAMILY Cyclin-like 14 145 IPR036915 -
Prci7g2180 311 SMART cyclin_7 46 139 IPR013763 -
Prci7g2180 311 SMART Cyclin_C_2 148 263 IPR004367 -
Prci7g2180 311 FunFam D6-type cyclin 143 237 - -
Prci7g2180 311 Pfam Cyclin, C-terminal domain 148 243 IPR004367 -
Prci7g2180 311 SUPERFAMILY Cyclin-like 129 250 IPR036915 -
Prci7g2180 311 CDD CYCLIN_AtCycD-like_rpt2 148 239 - -
Prci7g2180 311 Gene3D - 28 146 - -
Prci7g2180 311 Pfam Cyclin, N-terminal domain 21 145 IPR006671 -
Prci7g2180 311 FunFam D6-type cyclin 28 142 - -
Prci7g2180 311 Gene3D - 18 237 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci7g2180 Prci-Chr7 35484758 35486873 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci7g2180 1 294 Core Cell Cycle Gene Families AT4G03270 46.006 5.63e-81 246
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci7g2180 K18812 - gmx:100799951 399.823
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Prci7g2180 7 35484758 35486873 Prci7g2180 7 35484758 35486873 ECH