Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci7g2174 ATGGGAAGAGCACCTTGCTGTGACCAAAACGGACTCAAGAAGGGTCCATGGACCCCCGAGGAAGATCTAAAGCTTATCAACTACATCGAGGCTCATGGACCAGGCAACTGGCGAACCCTCCCCAAGAAAGCAGGTCTGCAAAGATGTGGCAAAAGTTGCCGCCTTCGATGGACAAATTACTTGAGACCCGATATCAAGAGAGGGAGATTCTCCTTTGAGGAAGAAGAGACTATCATTCAGTTGCACAGTATCATGGGAAACAAATGGTCTGCTATAGCAGCACGATTACCAGGACGAACAGATAATGAAATAAAGAACTACTGGAACACCCACATTAGGAAGAGACTGCTTCGGACGGGAATCGATCCTGTTACTCATGCCCCACGCCTCGACCTTCTTGAGATGTCCTCTATTCTAACGTCGGCGTTGATGACCAATCGATCACTTCTGCATCTGCAAAGTTTACTGGGGGCTCAAGCTTTGATGAACCCAGAAACATTGAAACTGGCCACCACTCTGTTAGCGTTCAAGAATGAGAGCCCAGATTTAGTTGCACAGAATCTACAACAAATCCTGCAGGATGGGAATCACCAAGTAGACTTTCAAGCCTCCCCAGTCAGTCAGATGCCAACTCAAACAGCCAACATGCGTGAAGGCCTTTCAAGCAACATCGCAAGCATGTGCTGTTCAAGTCCGGTAGAGACTTCACTTCCTTCATATTTGTGTGAGAATCTTAAACCGCGAGAAAACGGAGTTGATTTGCAAGGGAACCCAATGCAGTGTTTGATAAACAATGAAAATGTGCAAAACATAGGGTATGAGTCAGTTCTGTCAACCCCTCTGTCGAGCCCAACCCCATTGAATTCATCGTCCACGTATGTGAATAGCAGCGCGGAGGAGGAAAGGGATACCCATTGCAGCGACTTATTCAAGTTCGAAATTCCTGAGAGTCTGGACATCAGTGACTTCTTGTAA 975 0.4687 MGRAPCCDQNGLKKGPWTPEEDLKLINYIEAHGPGNWRTLPKKAGLQRCGKSCRLRWTNYLRPDIKRGRFSFEEEETIIQLHSIMGNKWSAIAARLPGRTDNEIKNYWNTHIRKRLLRTGIDPVTHAPRLDLLEMSSILTSALMTNRSLLHLQSLLGAQALMNPETLKLATTLLAFKNESPDLVAQNLQQILQDGNHQVDFQASPVSQMPTQTANMREGLSSNIASMCCSSPVETSLPSYLCENLKPRENGVDLQGNPMQCLINNENVQNIGYESVLSTPLSSPTPLNSSSTYVNSSAEEERDTHCSDLFKFEIPESLDISDFL 324
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci7g2174 324 PANTHER MYB FAMILY TRANSCRIPTION FACTOR 1 260 - -
Prci7g2174 324 CDD SANT 69 112 IPR001005 -
Prci7g2174 324 Gene3D - 13 66 - -
Prci7g2174 324 FunFam MYB-related transcription factor 13 66 - -
Prci7g2174 324 ProSiteProfiles Myb-like domain profile. 62 112 IPR001005 -
Prci7g2174 324 MobiDBLite consensus disorder prediction 280 300 - -
Prci7g2174 324 SUPERFAMILY Homeodomain-like 11 108 IPR009057 -
Prci7g2174 324 CDD SANT 16 61 IPR001005 -
Prci7g2174 324 Pfam Myb-like DNA-binding domain 14 61 IPR001005 -
Prci7g2174 324 Pfam Myb-like DNA-binding domain 67 111 IPR001005 -
Prci7g2174 324 ProSiteProfiles Myb-like domain profile. 9 61 IPR001005 -
Prci7g2174 324 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 9 61 IPR017930 -
Prci7g2174 324 SMART sant 13 63 IPR001005 -
Prci7g2174 324 SMART sant 66 114 IPR001005 -
Prci7g2174 324 Gene3D - 69 116 - -
Prci7g2174 324 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 62 116 IPR017930 -
Prci7g2174 324 MobiDBLite consensus disorder prediction 280 297 - -
Prci7g2174 324 FunFam Transcription factor MYB39 69 130 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci7g2174 Prci-Chr7 35457464 35458905 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci7g2174 1 324 MYB Transcription Factor Family AT4G21440 45.730 7.64e-101 298
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Prci7g2174 Myb_DNA-binding 1.9e-15 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci7g2174 K09422 - qsa:O6P43_000650 410.609