Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci7g2147 ATGATGCGTGCTTTGTCATGCAGCACCAGAGCTGCAGGACTAAAGAACAACACATACTTTGAAGATTCAGGGACCAATACCATGGAGAATGTTTTTTCCAAGATGTGTTCACCAGTGGCATTGAAGGGCCAGCCCGTGCAAGCTAATCCGGAGGAAGTTGACGAATTGCTGGGACAGGTTGAAATATGGCACTTTATGACTAGCTTCACCGACTCTGTTGCCCTCAAAGTTGCTGTGGAGCTCCGCATAGCTGACATTATCGACCACCATGGCCAACCCATCTCCCTGCAAAAGATTGTCGACGACATTGCCGACGCTCCCAACCCTGAAATCTCCTTCCTCTATCGCATCATGCGAGTTCTCGTCCGCCGAAAGATCTTCTCCACCCACCAGTCTGAATCCGGCGAGACCCTTTACGGATTGACCCGTGCTTCCAAATGGCTCCTCCGTGACACCAAGATGACCCTGTCCCCCATGATTCTCCTCGAGAACCACCCCATCCACCTGAATCCCGCTCACCACATTGGCGAATGTATCAGAGAAGGCACCGAAAACGGCACTGCTTTTTTCAAGTGCCATGGCCACGAGCAATTCGACCTCACTGGTTTGGAACCCGACTACAACAGGTTGTTCAACGAGGGCATGGTCTGCACCGCTAGGATTACGTCCAAGGCTGTTATTTCGGGGTACAAGGATGGATTCAACAAGATTCAATCCTTGGTGGACGTAGGAGGTGGTATCGGAGGATCACTGTCTGAGATTGTTCGAGCTTACCCCCACATCAAAGGTATCAACTTTGATCTGCCCCACGTGGTTGCCACTGCACCAAAGTACGACGGAATCACTCACGTTGGAGGAAACATGTTCGAGTCCATTCCTAAAGCCGATGCTATTTACATGAAGTGGATCCTGCATGACTGGAGCGACCAGCACTGCATCCAGATATTGAAGAACTGTAGGAAGGCGATCCCAGAGAAGACAGGAAAAGTGATAATAGTGGACCATGTTCTGCAACCAGAAGGGAACAATGGGCTGTTCGATGAGGTAGGGTATGCATTCGACATGATGCTGCTAGCACACAACGCTGGTGGGAGGGAAAGGACTGAGCAGGACTGGAAGAGGCTGTTTGAAGAAACTGGCTTCCCTCGTTACAACATCATCAAGATCAAGGCTCTCCAATCCATCATTGAGGCCTTCCCAATCTAA 1206 0.5033 MMRALSCSTRAAGLKNNTYFEDSGTNTMENVFSKMCSPVALKGQPVQANPEEVDELLGQVEIWHFMTSFTDSVALKVAVELRIADIIDHHGQPISLQKIVDDIADAPNPEISFLYRIMRVLVRRKIFSTHQSESGETLYGLTRASKWLLRDTKMTLSPMILLENHPIHLNPAHHIGECIREGTENGTAFFKCHGHEQFDLTGLEPDYNRLFNEGMVCTARITSKAVISGYKDGFNKIQSLVDVGGGIGGSLSEIVRAYPHIKGINFDLPHVVATAPKYDGITHVGGNMFESIPKADAIYMKWILHDWSDQHCIQILKNCRKAIPEKTGKVIIVDHVLQPEGNNGLFDEVGYAFDMMLLAHNAGGRERTEQDWKRLFEETGFPRYNIIKIKALQSIIEAFPI 401
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci7g2147 401 Pfam Dimerisation domain 74 122 IPR012967 GO:0046983
Prci7g2147 401 Pfam O-methyltransferase domain 174 381 IPR001077 GO:0008171
Prci7g2147 401 SUPERFAMILY "Winged helix" DNA-binding domain 58 151 IPR036390 -
Prci7g2147 401 PANTHER O-METHYLTRANSFERASE 62 383 IPR016461 GO:0008168
Prci7g2147 401 Gene3D - 46 148 IPR036388 -
Prci7g2147 401 CDD AdoMet_MTases 240 337 - -
Prci7g2147 401 Gene3D Vaccinia Virus protein VP39 150 401 IPR029063 -
Prci7g2147 401 PIRSF O-mtase 42 401 IPR016461 GO:0008168
Prci7g2147 401 ProSiteProfiles SAM-dependent O-methyltransferase class II-type profile. 63 400 IPR016461 GO:0008168
Prci7g2147 401 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 154 398 IPR029063 -
Prci7g2147 401 FunFam O-methyltransferase family protein 150 399 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci7g2147 Prci-Chr7 35263984 35268738 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci7g2147 47 401 Monolignol Biosynthesis Gene Families AT5G54160 37.119 2.03e-77 242
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci7g2147 K22588 - gmx:100800801 603.208