Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci7g2146 ATGGAGCTCCTTTCAACCATATGTGCCTCTTTCTGCCCTCTTGGGGAAGGCTTGCTTTACGTGTGCCCTATGAGCCGCGCTCCGTCGTCCGACGTCACCAATTTTTGGACGACCATGCTTGTTTCACAGAGAGATTCAGGGACCAATACCATGGAGAATGTTTTTTCCAAGATGTGTTCACCAGTGGCATTGAAGGGCCAGCCCGTGCAAGCTAATCCGGAGGAAGTTGACGAATTGCTGGGACAGGTTGAAATATGGCACTTTATGACTAGCTTCACCGACTCTGTTGCCCTCAAAGTTGCTGTGGAGCTCCGCATAGCTGACATTATCGACCACCATGGCCAACCCATCTCCCTGCAAAAGATTGTCGACGACATTGCCGACGCTCCCAACCCTGAAATCTCCTTCCTCTATCGCATCATGCGAGTTCTCGTCCGCCGAAAGATCTTCTCCACCCACCAGTCTGAATCCGGCGAGACCCTTTACGGATTGACCCGTGCTTCCAAATGGCTCCTCCGTGACACCAAGATGACCCTGTCCCCCATGATTCTCCTCGAGAACCACCCCATCCACCTGAATCCCGCTCACCACATTGGCGAATGTATCAGAGAAGGCACCGAAAACGGCACTGCTTTTTTCAAGTGCCATGGCCACGAGCAATTCGACCTCACTGGTTTGGAACCCGACTACAACAGGTTGTTCAACGAGGGCATGGTCTGCACCGCTAGGATTACGTCCAAGGCTGTTATTTCGGGGTACAAGGATGGATTCAACAAGATTCAATCCTTGGTGGACGTAGGAGGTGGTATCGGAGGATCACTGTCTGAGATTGTTCGAGCTTACCCCCACATCAAAGGTATCAACTTTGATCTGCCCCACGTGGTTGCCACTGCACCAAAGTACGACGGAATCACTCACGTTGGAGGAAACATGTTCGAGTCCATTCCTAAAGCCGATGCTATTTACATGAAGTGGATCCTGCATGACTGGAGCGACCAGCACTGCATCCAGATATTGAAGAACTGTAGGAAGGCGATCCCAGAGAAGACAGGAAAAGTGATAATAGTGGACCATGTTCTGCAACCAGAAGGGAACAATGGGCTGTTCGATGAGGTAGGGTATGCATTCGACATGATGCTGCTAGCACACAACGCTGGTGGGAGGGAAAGGACTGAGCAGGACTGGAAGAGGCTGTTTGAAGAAACTGGCTTCCCTCGTTACAACATCATCAAGATCAAGGCTCTCCAATCCATCATTGAGGCCTTCCCAATCTAA 1275 0.509 MELLSTICASFCPLGEGLLYVCPMSRAPSSDVTNFWTTMLVSQRDSGTNTMENVFSKMCSPVALKGQPVQANPEEVDELLGQVEIWHFMTSFTDSVALKVAVELRIADIIDHHGQPISLQKIVDDIADAPNPEISFLYRIMRVLVRRKIFSTHQSESGETLYGLTRASKWLLRDTKMTLSPMILLENHPIHLNPAHHIGECIREGTENGTAFFKCHGHEQFDLTGLEPDYNRLFNEGMVCTARITSKAVISGYKDGFNKIQSLVDVGGGIGGSLSEIVRAYPHIKGINFDLPHVVATAPKYDGITHVGGNMFESIPKADAIYMKWILHDWSDQHCIQILKNCRKAIPEKTGKVIIVDHVLQPEGNNGLFDEVGYAFDMMLLAHNAGGRERTEQDWKRLFEETGFPRYNIIKIKALQSIIEAFPI 424
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci7g2146 424 SUPERFAMILY "Winged helix" DNA-binding domain 81 174 IPR036390 -
Prci7g2146 424 Gene3D - 69 171 IPR036388 -
Prci7g2146 424 Pfam O-methyltransferase domain 197 404 IPR001077 GO:0008171
Prci7g2146 424 ProSiteProfiles SAM-dependent O-methyltransferase class II-type profile. 86 423 IPR016461 GO:0008168
Prci7g2146 424 PANTHER O-METHYLTRANSFERASE 85 406 IPR016461 GO:0008168
Prci7g2146 424 FunFam O-methyltransferase family protein 173 422 - -
Prci7g2146 424 CDD AdoMet_MTases 263 360 - -
Prci7g2146 424 Pfam Dimerisation domain 97 145 IPR012967 GO:0046983
Prci7g2146 424 Gene3D Vaccinia Virus protein VP39 173 424 IPR029063 -
Prci7g2146 424 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 177 421 IPR029063 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci7g2146 Prci-Chr7 35261851 35268738 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci7g2146 70 424 Monolignol Biosynthesis Gene Families AT5G54160 37.119 8.07e-77 241
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci7g2146 K22588 - gmx:100800801 603.208