Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci7g2143 ATGGCCACAGCTAGTAACGGTGGCAAATCCTCCGACGGTGGTGCAGAAAGTCGAGATTGGGAGATTGAAAGAGGTAAAGATTTAGACTTGAGTGGTGAGAGGCAGCAATGGAAGCCGGTTTTTGAGGATGCTTCCGTGACCAACAGGCCTCTCAAGAAAATCCGGAGCCCCCAGCGCCACAGCTCAAACCAGGATCAATCCTCTGTTTCCATTCTACCGCGTCCTTCCTCCTCCATTCCCTCCTCGCTTCCTTCTTCTTCGTCTTCCAGAATCGTCTTCCCTTTTGCCTTCGATGGTTCTCAACAACCCATGCAATTTCCCCCTCAACAATTTGGTTCTGCAAATTTGCCCGTGTTTCGCCCGCCATTTCATGCCATGCAGACTCGGCAACAGATGATATCTTTCGGTTCCCAGCAGCAAAACATTGGGTACCCACAATTCCCGGCCCAAGACTCTGGAGTTGCACCCCCGCATTACCATCATCATGATCATCATCATCAGCAGCAGCAGCAGCAGCTTCTTCAGTATTGGAGAGACGCATTGAATCTGAGTCCGAGAGGAAGGATGATGATGATGAACAGCGTGGGACCGGACGGGAGGCCAATGTATAGGCCCCCTCCTCAGCCTATAAATACTACGAAGCTCTACAGAGGGGTGAGGCAGCGTCATTGGGGGAAATGGGTGGCAGAGATCCGTCTTCCTCGCAATAGGACTCGCCTCTGGCTGGGAACATTTGACACGGCGGAAGATGCTGCCTTAGCTTATGATCGCGAGGCCTTTAAGCTGAGGGGAGAGAATGCTAGGCTCAACTTCCCCGACCTCTTCCTCAATAAGGATAAGCCATCCTCAGCAGCCCCGGATTCATCTGCTTCTTCTCCCTCCACTCCCCATCAAGGATCAACGTCCAAACACGCTGACTCTGCCCCAGAAGCTCCAATTGCGGAGGAGAAGCCTCCGCAACGGCCGCCGGAAGAGAGTACCGACAATGATTCTGGAATAGGGTCGAGTGATGCTACAATGAGCGACGAAGGACAGGCGGCATCTAATGCTGGAACAGGGGAGGGCACTTCGACGTCGCAAGAACTGGTTTGGGGCGAAATGGCGGCTTGGTTCAATGCAATTCCGACGGGCTGGGGTCCGGGCAGCCCTGTGTGGGATGATTTGGACACATTTCAGTCGCAGCTTCCTTTTTTCAATCCTAATCACCAGGAATTTAAGGATGCGGATACCCACAGACAGTAA 1242 0.529 MATASNGGKSSDGGAESRDWEIERGKDLDLSGERQQWKPVFEDASVTNRPLKKIRSPQRHSSNQDQSSVSILPRPSSSIPSSLPSSSSSRIVFPFAFDGSQQPMQFPPQQFGSANLPVFRPPFHAMQTRQQMISFGSQQQNIGYPQFPAQDSGVAPPHYHHHDHHHQQQQQQLLQYWRDALNLSPRGRMMMMNSVGPDGRPMYRPPPQPINTTKLYRGVRQRHWGKWVAEIRLPRNRTRLWLGTFDTAEDAALAYDREAFKLRGENARLNFPDLFLNKDKPSSAAPDSSASSPSTPHQGSTSKHADSAPEAPIAEEKPPQRPPEESTDNDSGIGSSDATMSDEGQAASNAGTGEGTSTSQELVWGEMAAWFNAIPTGWGPGSPVWDDLDTFQSQLPFFNPNHQEFKDADTHRQ 413
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci7g2143 413 CDD AP2 214 274 IPR001471 GO:0003700|GO:0006355
Prci7g2143 413 SUPERFAMILY DNA-binding domain 215 273 IPR016177 GO:0003677
Prci7g2143 413 MobiDBLite consensus disorder prediction 278 361 - -
Prci7g2143 413 PRINTS Ethylene responsive element binding protein signature 238 254 IPR001471 GO:0003700|GO:0006355
Prci7g2143 413 PRINTS Ethylene responsive element binding protein signature 216 227 IPR001471 GO:0003700|GO:0006355
Prci7g2143 413 Gene3D AP2/ERF domain 215 273 IPR036955 GO:0003700|GO:0006355
Prci7g2143 413 Pfam AP2 domain 216 264 IPR001471 GO:0003700|GO:0006355
Prci7g2143 413 MobiDBLite consensus disorder prediction 14 33 - -
Prci7g2143 413 MobiDBLite consensus disorder prediction 325 361 - -
Prci7g2143 413 ProSiteProfiles AP2/ERF domain profile. 215 272 IPR001471 GO:0003700|GO:0006355
Prci7g2143 413 MobiDBLite consensus disorder prediction 60 87 - -
Prci7g2143 413 SMART rav1_2 215 278 IPR001471 GO:0003700|GO:0006355
Prci7g2143 413 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF061 19 388 - -
Prci7g2143 413 MobiDBLite consensus disorder prediction 1 87 - -
Prci7g2143 413 MobiDBLite consensus disorder prediction 282 305 - -
Prci7g2143 413 FunFam Ethylene-responsive transcription factor 2 214 273 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci7g2143 Prci-Chr7 35240627 35242750 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci7g2143 177 387 AP2-EREBP Transcription Factor Family AT2G20880 50.943 3.05e-62 202
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2 or ERF-ERF Prci7g2143 AP2 2.9e-13 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci7g2143 - - qsa:O6P43_028790 471.47
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Prci7g2143 7 35240627 35242750 Prci7g2143 7 35240627 35242750 ECH