Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci7g2136 ATGGCCTTAGATCATCACTTTGAGGATTCTGGACAGCCAGCTGGTGCCTCTGGAGATAAATCTTATTTGGAAAAGTGGAATTCTGCCACTGAAGCCATTGCAGATGGTGATAGGGATGCTTCTGGCGACTTTGAATGCAATATCTGCCTGGATTCCTTGCATGATCCAGTGTTAACTCTTTGCGGTCATCTCTACTGCTGGCCTTGCATTTACGAATGGCTCCATATTCATAGCGTTTCTTCTCAGAACATAGAGCAGAAGAGGACATCCTGCCCAGTTTGCAAATCAGAAATCTCTCAATCCTCCCTCATTCCAGTATATGGCCGTATCCAAACGGCAACACCTTCCAAATGCAAGTCTCACCATGTAGGGACTGGCATACCTCCAAGACCTCACCGTCCTGTCTCAGTTCATGATTTTCCAAGATCATGTAATGCTGCAACTGCTTTTCGTCACTCACCAATATCACATAACAGTGTAGCTGCAGCTCATGACTCACGAAGATCATATAATACCACAACTGCTTCCCAACCAGCTTCTCATTTTCATCAGCCCCTTTATCCTTATCACAGTCAACAGTTCAATACACATGGAGTTTTTGGTCAGATGATATATGCTAGAGTCTTTGGTAATCAGTTGACAAACACGTACCCTTCTAATTCATATGGTCTCGTGGGGATCAGCAATCCGAGGGTGAGAAGGCATTTGATGCAAGTGGACAAGTCACTCAGCAGAGTCTGTATTTTCTTCTTCTGCTGCGCGGTTTTTTGTTTCCTCTTGTTCTGA 786 0.4453 MALDHHFEDSGQPAGASGDKSYLEKWNSATEAIADGDRDASGDFECNICLDSLHDPVLTLCGHLYCWPCIYEWLHIHSVSSQNIEQKRTSCPVCKSEISQSSLIPVYGRIQTATPSKCKSHHVGTGIPPRPHRPVSVHDFPRSCNAATAFRHSPISHNSVAAAHDSRRSYNTTTASQPASHFHQPLYPYHSQQFNTHGVFGQMIYARVFGNQLTNTYPSNSYGLVGISNPRVRRHLMQVDKSLSRVCIFFFCCAVFCFLLF 261
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci7g2136 261 MobiDBLite consensus disorder prediction 1 21 - -
Prci7g2136 261 ProSiteProfiles Zinc finger RING-type profile. 46 95 IPR001841 -
Prci7g2136 261 PANTHER E3 UBIQUITIN-PROTEIN LIGASE RNF5-RELATED 7 258 IPR045103 GO:0005783|GO:0006511|GO:0061630
Prci7g2136 261 SMART ring_2 46 94 IPR001841 -
Prci7g2136 261 Pfam Zinc finger, C3HC4 type (RING finger) 46 94 IPR018957 GO:0046872
Prci7g2136 261 ProSitePatterns Zinc finger RING-type signature. 61 70 IPR017907 -
Prci7g2136 261 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 22 126 IPR013083 -
Prci7g2136 261 SUPERFAMILY RING/U-box 40 107 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci7g2136 Prci-Chr7 35178642 35179427 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci7g2136 19 246 C3H Transcription Factor Family AT4G27470 37.553 1.81e-40 138
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci7g2136 K10666 - gmx:100785491 240.35
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Prci7g2136 7 35178642 35179427 Prci7g2136 7 35178642 35179427 ECH