Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci7g2129 ATGGGTTGCATATGCTCCAAGACTTCAGCTGTGGAAGACAGCCGAGAAGGTTTGACAACGAAATTGTCATCGTTGAGCAAAAGGTCATCGGAGCTGAATGTTTCACGACTTAATTCATCAAAAAGGGATGAGGGAGTTTGGACCAAAAATGTGCTAGATGGTAGAGATGTAAAAGCTTCGTTGGTTATTAAGAAACCCAACGGTTTGGTGAAGTTTTATAATGATCAAATTAGGGAGGAGAAAATTGAGAAACCCGAACTTACCGTTCTTAATCATCCTGGTCTTGGTAAAGTACCAAACGCTACAGAAGGAGAACAAGTTGCGGCAGGATGGCCAGCTTGGCTATCTTCTGTTGCTGGTGAAGCGATCAAGGGATGGATACCTCGGAGAGCTAATACTTTTGAGAGGTTATATAAAATTGGCCAAGGAACATACAGTTCTGTTTATAAGGCACGTGATGTGACTTACCAAAAGACAGTTGCTTTGAAGAAAGTACGCTTTGATAATCTTGATCCTGAGAGTGTCAAGTTTATGGCAAGAGAAATTTTTGTTCTGCGTTTGCTTGACCATCCTAATGTAATAAAGTTAGAGGGCTTGATAACATCCCAGACATCTCGCAGCTTGTACCTCATTTTTGAGTACATGGAACATGATCTTACAGGACTTGTTTCACATCCTGGCATTAAGTTTTCAGAGCCACAGATTAAGTGCTACATGCAGCAGCTTCTCAGTGGATTGGATCATTGTCATAGTCGTGGTGTCCTCCACCGAGACATAAAGGGCTCAAATCTTCTCATTGACAATAATGGCATCTTAAAGATTGCAGATTTTGGTTTGGCAAGCTTTTTTGACCCTCATCACAGTGTTCCATTGACCAGCCGAGTGGTAACTCTTTGGTATAGGCCTCCAGAACTTATACTCGGGGCATCTCATTATGGTGTTGCAGTGGATTTGTGGAGTACTGGTTGTATACTGGGGGAACTATATTCTGGCAGGCCCATATTGCCCGGAAAGACAGAGGTTGAGCAATTGCATAGGATTTTTAAGCTTTGTGGTTCACCATCTGAAGATTACTGGCTTAAATTGCGGTCACCACATTCAACAGTATTCAAGCCTCCACACCATTATAGACGTTGTGTTGCTGAAACATTCCAGGAATATCCACCTGCTTCTGTGAGGCTAATAGAGACTCTACTTTCCATAGATCCTGCACATCGAGGAACTGCAGCTACTGCTTTAAAAAGCGAGTTCTTTACCATGGAACCCCTTGCTTGTGATCCTTCAAGTTTACCAAAATATCCTCCCAGCAAAGAGATTGATGCTAAGTTGCGAGATGAAGCAACCAGAAGGCAAAGAGCCGTTGGTGTGAGGGAGCTGAAAGTCGGCATGGGAGTTAGACCAGAAAAGGGACATCGAGCGCTTGCAGCAAATAACAATGCTGACCCACGCATGTCAATGCAGCAAGGACGTCATTCTAGCTCAAGGAGTCGAAGCGAATTGTTCAATCCTTCCAGAGAATCTGCTTCTGGGTTGTTGGTTTTTCCACACAAGCAGTCAGACAATGTCAAGGAAATGGAAAATAATTTCTCTGGGTACAGGATCTCTTCACATTCAGGTCCATTGGTTCAGGGTCCTGCCTGGGTAAAGGCAGGGAAGGACGTGGATGAGCGCCATCTTGGGTCAAACGGAGTGAATCTTTCAAAACTATCAGGTTTAGTTGCATCTAGGACTTCAATGTCTGAAGATCAGGAAGAAAAATCACATTTATCACAGCCCGGAAAAAGAGTTGATACACGAAAACCTGTGGAGTCAACTAGTGGATCGGAGTTAAGAAGAAGACAGGCCCAGAAACACCAGTCTCAGCGAATTGATCTCTGTCACGGAGAACATGGAAGGACCCCCACTAAAGAATTAACTCCGGAAGGGTATGGCAGGGGAAACAAGATCTATCTCTCGGGTCCATTGATGGTATCGTCAAACAACATGGATCAGATGCTTAAAGAGCATGATCGAAAGATCCAGGAATTTTCAAGACGAGCTAGAGTTGACAAGTCAAGAGGCGAAAAAGTTCATGCAAAGTAA 2082 0.4371 MGCICSKTSAVEDSREGLTTKLSSLSKRSSELNVSRLNSSKRDEGVWTKNVLDGRDVKASLVIKKPNGLVKFYNDQIREEKIEKPELTVLNHPGLGKVPNATEGEQVAAGWPAWLSSVAGEAIKGWIPRRANTFERLYKIGQGTYSSVYKARDVTYQKTVALKKVRFDNLDPESVKFMAREIFVLRLLDHPNVIKLEGLITSQTSRSLYLIFEYMEHDLTGLVSHPGIKFSEPQIKCYMQQLLSGLDHCHSRGVLHRDIKGSNLLIDNNGILKIADFGLASFFDPHHSVPLTSRVVTLWYRPPELILGASHYGVAVDLWSTGCILGELYSGRPILPGKTEVEQLHRIFKLCGSPSEDYWLKLRSPHSTVFKPPHHYRRCVAETFQEYPPASVRLIETLLSIDPAHRGTAATALKSEFFTMEPLACDPSSLPKYPPSKEIDAKLRDEATRRQRAVGVRELKVGMGVRPEKGHRALAANNNADPRMSMQQGRHSSSRSRSELFNPSRESASGLLVFPHKQSDNVKEMENNFSGYRISSHSGPLVQGPAWVKAGKDVDERHLGSNGVNLSKLSGLVASRTSMSEDQEEKSHLSQPGKRVDTRKPVESTSGSELRRRQAQKHQSQRIDLCHGEHGRTPTKELTPEGYGRGNKIYLSGPLMVSSNNMDQMLKEHDRKIQEFSRRARVDKSRGEKVHAK 693
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci7g2129 693 ProSitePatterns Protein kinases ATP-binding region signature. 140 163 IPR017441 GO:0005524
Prci7g2129 693 FunFam probable serine/threonine-protein kinase At1g54610 217 458 - -
Prci7g2129 693 ProSitePatterns Serine/Threonine protein kinases active-site signature. 254 266 IPR008271 GO:0004672|GO:0006468
Prci7g2129 693 CDD STKc_CDK9_like 134 418 - -
Prci7g2129 693 SMART serkin_6 134 418 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci7g2129 693 Gene3D Phosphorylase Kinase; domain 1 121 216 - -
Prci7g2129 693 MobiDBLite consensus disorder prediction 575 645 - -
Prci7g2129 693 PANTHER CELL DIVISION PROTEIN KINASE 132 423 - -
Prci7g2129 693 MobiDBLite consensus disorder prediction 480 504 - -
Prci7g2129 693 MobiDBLite consensus disorder prediction 470 504 - -
Prci7g2129 693 SUPERFAMILY Protein kinase-like (PK-like) 128 421 IPR011009 -
Prci7g2129 693 MobiDBLite consensus disorder prediction 667 693 - -
Prci7g2129 693 Pfam Protein kinase domain 135 418 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci7g2129 693 ProSiteProfiles Protein kinase domain profile. 134 418 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci7g2129 693 Gene3D Transferase(Phosphotransferase) domain 1 217 457 - -
Prci7g2129 693 FunFam probable serine/threonine-protein kinase At1g54610 121 216 - -
Prci7g2129 693 MobiDBLite consensus disorder prediction 579 636 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci7g2129 Prci-Chr7 35118878 35125056 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci7g2129 126 458 Core Cell Cycle Gene Families AT5G10270 48.138 1.61e-107 334
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_CDK-CRK7-CDK9 Prci7g2129 Pkinase 2.1e-65 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci7g2129 - - gmx:100807590 961.444