Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci7g2117 ATGTTACGCTTAGTATTTGATATGATTGCCCCTGAAAAATCGGACTTTTGGTTGTTTAAGAGGAAGGGACTAGGGCTTTTATTCCAGATTGTGTATGTGTTGTGGGTTTTTCTACTGTTCCCTCGGCCTGTGGCGGGTTTGAGACCATTAAGAGAAAGAACTCGGTCATGGAGCCATGAGTGGCTATTTACCGCAAAAGATGAAAGTGATCAATTTTCACAATGGAACATAACAGGAACTTACAAAGGGGCATGGAATTTTTTAGATAATGCAAATGGCTCTTCAAGATTTTCAGACATTAGAAAAACAAAGGGCAGTTCTGTAATTGAATTGTTTAGTACACCCACAAAAATAACTGGTGTGCATTATGTTCAGGGGGTGATCATATTCCATAATGTGTTTGACAACGAGTACAATGTTGGTGGTGCTCAAATCAGAGTGGAAGGTGTATATATATGGCCTTTTAAACAGCTTCGAATGGTAACTAACAGTGGAAGAGAGGGAAATTCAAATCAGGATGAAGATTATATCTTATCTAATCCATATCATCTGCTTGGAATGTTCTCATCTCAGGTATTCCAAGAATCACGAGATAAGACATGGGGAAGAAAACATTCTCCAATGCATGACATGGAGAAACATTGTAATATTGAAATTGCAGCACGGTTTTCACGCCTATCATCATCAAAGAATGATGGGGATCGTGATCGATTTCACCTAGAAGGATTGATGGAGAGTCCCTCAGTGGATGATGATGGGGATTGCTTCTCACCTTTAACGTTAAATGCAACTTCTGTTAACATTGAGGTCTACTATAACAAAGCAGTGAACTACACCTTGATGGTTACATTTATCTCTTTCTTGCAAGTTCTTCTATTGATTCGGCAGATGGAACATAGCAACACTCAATCTGGGGCTGCTAAGGTTTCAATAATAATGATTGGCCAACAGGCTATAATGGATGCTTATCTTTGCCTTTTACATCTGACTGCAGGAATATTAGTTGAATCTTTGTTTAATGCTTTTGCAACTGCTGCTTTTTTCAAGTTTGTTGTCTTCTCGATATTTGAGATGAGATATCTCCTTGCGATATGGAAGGCAAATAGGCCTTTGAGTAATGGGGAAGGCTGGGAGACAATGAGGCGTGAGCTTTCTGCGTTATACATTCGCTTCTATGGGATCCTGATAGGAGGAATTCTGCTCATGTACCAGTTCCATAATTATTTGAGACCTATACTTCTTCTCATGTACTCATTTTGGATGCCGCAAATAATTACCAATGTTATTCGTGATTCACGCAAACCATTGCATCCTCATTATATCTTAGGGATAACTGCCACTCGCCTAGCAGTGCCATTATATATATTTGGTTGCCCAAAAAACTTCATGCGCATTGAACCAGACGAGAGCTGGTGCTTGTGTTTGGCTGTATTTATTGGACTTCAGGCTGCAATTCTTCTACTTCAGAACTATCTTGGGTCCCGTTGGTTCATTCCTCGTCAGATTCTGCCTGAGAAATACAGCTATTACAGGAGATTTGGTCAGAATACAAATCATGCTACAGATTGTGTTATTTGCATGACGGCTATTGATCTTTCTCAGCGATCAAATGATTGCATGGTGACACCTTGTGAGCATTTCTTCCACTCTGGTTGTTTGCAAAGATGGATGGATATCAAGATGGAGTGCCCGACATGCCGGCGCCCTCTGCCACCAGCTTAG 1722 0.4042 MLRLVFDMIAPEKSDFWLFKRKGLGLLFQIVYVLWVFLLFPRPVAGLRPLRERTRSWSHEWLFTAKDESDQFSQWNITGTYKGAWNFLDNANGSSRFSDIRKTKGSSVIELFSTPTKITGVHYVQGVIIFHNVFDNEYNVGGAQIRVEGVYIWPFKQLRMVTNSGREGNSNQDEDYILSNPYHLLGMFSSQVFQESRDKTWGRKHSPMHDMEKHCNIEIAARFSRLSSSKNDGDRDRFHLEGLMESPSVDDDGDCFSPLTLNATSVNIEVYYNKAVNYTLMVTFISFLQVLLLIRQMEHSNTQSGAAKVSIIMIGQQAIMDAYLCLLHLTAGILVESLFNAFATAAFFKFVVFSIFEMRYLLAIWKANRPLSNGEGWETMRRELSALYIRFYGILIGGILLMYQFHNYLRPILLLMYSFWMPQIITNVIRDSRKPLHPHYILGITATRLAVPLYIFGCPKNFMRIEPDESWCLCLAVFIGLQAAILLLQNYLGSRWFIPRQILPEKYSYYRRFGQNTNHATDCVICMTAIDLSQRSNDCMVTPCEHFFHSGCLQRWMDIKMECPTCRRPLPPA 573
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci7g2117 573 Pfam Ring finger domain 522 567 IPR001841 -
Prci7g2117 573 CDD RING-H2_TUL1-like 517 572 - -
Prci7g2117 573 SMART ringv_2 522 567 IPR011016 GO:0008270
Prci7g2117 573 ProSiteProfiles Zinc finger RING-type profile. 523 567 IPR001841 -
Prci7g2117 573 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 511 573 IPR013083 -
Prci7g2117 573 SMART ring_2 523 566 IPR001841 -
Prci7g2117 573 FunFam E3 ubiquitin-protein ligase, putative 509 573 - -
Prci7g2117 573 PANTHER RING ZINC FINGER PROTEIN 141 572 - -
Prci7g2117 573 SUPERFAMILY RING/U-box 522 572 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci7g2117 Prci-Chr7 35009755 35018478 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci7g2117 518 573 C3H Transcription Factor Family AT2G35420 37.500 7.16e-08 52.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci7g2117 K23788 - qsu:112035018 989.949
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Prci7g2117 7 35009755 35018478 Prci7g2117 7 35009755 35018478 ECH