Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci7g2116 ATGGCTCCGGCTTCATCCTCTTCCTTGGTCACTTGTGTGCTGTTTCTTCTTCTCTTGCACTCATCATCCATCTTTAACAATCTCTCTGCAGCAAAACACGGCGTGACCAACCGTCACAACCGGCACCCCCATCACCTCCACCATACCCAGAATCCTCCATTAAACCCACGGCTTTACCGAGCTTTTCTTGCTCTTCAAGCATGGAAGCGCGTGATGTACTCTGATCCACGTAACTTCACTCACAATTGGGTAGGCCCTTCGGTCTGCAACTATAATGGCATATATTGCGCTCCATCTGTAGATGATCCTAAAGCCACGGTCGTGGCTGGCATTGATCTCAATCATGCAGACATAGCTGGGTTCTTACCCGATGAACTAGGCCTGCTCTGCGATCTCGCTCTTCTCCATCTCAACAGTAATCGATTTTGTGGCATCCTCCCAATGACCTTAAGCAACCTCACTCTTCTGTACGAGCTTGATATCAGCAACAACAGATTTGTAGGGCCATTTCCTTCTGTAGTGCTTTCCCTTCCCACCCTTCGATATCTTGACATTCGCTATAATGAGTTTGAAGGGGCATTGCCTCCTCAACTATTCAACAAAAACTTTGATGCCATTTTCCTCAACAGCAATCGTTTCACCAGTTCAATCCCAACAAGTTTAGGGAAAAGCTCAGCCTCTGTGATCGTGTTTGCTAATAACAAATTTGGAGGGTGTCTCCCAGAAAGCATAGTCAACTTTGCTGATACCTTGGAAGAGCTGGTCTTAATAAACACCAGTTTGTCTGGTTGTTTGCCTCAGCAAGTTGGGTTTCTGTATAAACTAAGAGTATTGGATGTTAGCTTTAACAAAATTGTGGGTCCCATACCTTACAGCCTTGCAGGGTTGTCTCATTTGGAGCAGCTAAATTTGGGACATAATACGTTGAGTGGTGCAGTGCCAATGGGGGTTTGTGAACTGCCGAACTTGAACAACTTCACGTTCTCTTATAACTTCTTCTGCGAGGAAGAGGGTATTTGTCAGAATCTGACGTCTAAAAACATCGTGTTCGACGATCGCCGGAACTGCTTGCCGGAGAAGCCATTGCAGAGGAGCCAAAAGGAATGCAATGCGGTCCTCGAGCACCCAGTTGATTGCTCTGAGCTTTGCTGCGTCGGAGGTGTCACTTCTGGTTCAGTGGCTATCCCACCTGCTCTAACTCCAACAGGCATGCCTGTATCTTCACCAGTTACGGCACCGGCATATCCATGA 1251 0.4708 MAPASSSSLVTCVLFLLLLHSSSIFNNLSAAKHGVTNRHNRHPHHLHHTQNPPLNPRLYRAFLALQAWKRVMYSDPRNFTHNWVGPSVCNYNGIYCAPSVDDPKATVVAGIDLNHADIAGFLPDELGLLCDLALLHLNSNRFCGILPMTLSNLTLLYELDISNNRFVGPFPSVVLSLPTLRYLDIRYNEFEGALPPQLFNKNFDAIFLNSNRFTSSIPTSLGKSSASVIVFANNKFGGCLPESIVNFADTLEELVLINTSLSGCLPQQVGFLYKLRVLDVSFNKIVGPIPYSLAGLSHLEQLNLGHNTLSGAVPMGVCELPNLNNFTFSYNFFCEEEGICQNLTSKNIVFDDRRNCLPEKPLQRSQKECNAVLEHPVDCSELCCVGGVTSGSVAIPPALTPTGMPVSSPVTAPAYP 416
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci7g2116 416 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 246 336 - -
Prci7g2116 416 SUPERFAMILY L domain-like 62 345 - -
Prci7g2116 416 Gene3D Ribonuclease Inhibitor 62 225 IPR032675 -
Prci7g2116 416 Pfam Leucine rich repeat 250 309 IPR001611 GO:0005515
Prci7g2116 416 FunFam Leucine-rich repeat extensin-like protein 1 62 223 - -
Prci7g2116 416 PANTHER LEUCINE-RICH REPEAT EXTENSIN-LIKE PROTEIN 3-RELATED 16 390 - -
Prci7g2116 416 Gene3D Ribonuclease Inhibitor 226 357 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci7g2116 Prci-Chr7 35006961 35008707 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci7g2116 55 409 Trihelix Transcription Factor Family AT2G15880 53.521 3.62e-139 413
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci7g2116 - - gmx:100782629 623.239